CCDS Home FTP Process Releases & Statistics
Collaborators EBI HGNC MGI NCBI
Contact Us email CCDS
Genome Displays Related Resources Gene HomoloGene MANE RefSeq
|
|
Report for CCDS17058.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
17058.1 |
Public |
Mus musculus |
2 |
Zswim3 |
23 |
108 |
98 |
|
Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39
Review status: Provisional (this record has not been manually reviewed by the collaboration) Sequence IDs included in CCDS 17058.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
---|
|
|
EBI |
ENSMUST00000052107.4 |
ENSMUSP00000050970.3 |
Accepted |
alive |
|
|
|
NCBI |
NM_178375.2 |
NP_848462.1 |
Accepted |
alive |
|
RefSeq |
Length |
Related UniProtKB/SwissProt |
Length |
Identity |
Gaps |
Mismatches |
NP_848462.1 |
695 |
Q8CFL8 |
695 |
100% |
0 |
0 |
Chromosomal Locations for CCDS 17058.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (2088 nt): ATGGAGCTAGGCAGCTGCTTTAAGACCTACGAGGACTTCAAGGAGTGTTTCAGCGCCTACAAAAAGGAGA CCAGGTGCTCCTTCATTGTCAGGGACTGCATCTCCGTCCGCTTCCATAACCTCAACAACGGCACCTCTTT CCGCGAGGATATCCTATATGTGCAGGTGAAATTTGTCTGTATTCGGACGCAGTCAAACAGGAAGAAAACT CGGAAGGTGGACAGGTGTCCAGCGTATCTGCTGCTGCAATACAACGAGACTCTAGATAGACTGTTTATCA GTGAGTTGAATACCCAGCACATTCATGCTGACTCTAATGCTTCTGGAGGAATCCCTGCTAGCAAGCCTCA GGCAATATGTCTACACAAACTCCCGCCGGTGCAGCTCAGCATCAGGAAAGACCTTGATACAGCAGAGAAG CCCTCAGTAGAGCCGTCATTTTGCCTCGATAAGATACACAAGCCCTCAAATCCAGAACAGGAGGGCATCA GTCCTTCTGATATGGCCAAGATAGCAAAAGTGATGAAGAACTTTCTTACCGTGGACGAGGGCTCAATGGC CTCCTTCAGTGTGGGCACCAGCCAAGACCTAGACCGACTCAGCTTCCAGAGCAGCAAGATGAGTGACCTG TTCGCCCGATTCCCAGAGACACTCTTGCTGCACCGGGTGGAAAACAGCCAGGGCCATATTCTGTATGCTT TCTTGGTGGAGAACAAGGAGCGAGAGAGTCGAGTGGTGCACTTCGCTGTGCTCAAGGCTGAGACAGCGCC TTCTGTGGCCAAGATGCTCAATATCTTTACAGAATTCAACTCTGATTGGCCCAAGGTCAAGATGGTCTTT GTGGACCCTTCATTCCCTCACCGAGCGATCTTACAGGAGATCTTCCCCTCTGCCCGCACTCTCCTCTCTA TCTACCACACCACTCGTCTCTTGGAGAAGAAGTTACACCAGAGTTCAGTAAATGCGTCTTTTAAAAGGCT CATGAAAGAAGCTCTGCGGGAAGCTGTGTTTGTCTCTTCTGATGCAAGCCTAAAAAATCTCTGTGAGATG TCCCAAGTCCTACTAGATGAGGAACTCTTCAGTTTCCTCCAGGCCCATTGGTTCTCCTGTGAACTGCTGT GGTACATACATGTGAGGAAGGGCCTGCATGCATGTAACACCTACATGGACAGCCTAGACATAGTCACCAG CAAGGTGTCAAGCCTCTTTCGGGAACAGCGGTCTCTGCTGGACTGCATCCTTCACTTTGTGGATTACATA GACTTCTTTAATACCAAAGGTCTGAAGAGCTTGCCCACAAATGCTCCCAAGTTAAGGAGAACTCGGCTCC CAAGCACGCCTCCAAGGCCCAAGAAGCCTTTTAGAATTTGTGGTGGGGGTGACACCAGGCTCCCTGTGGA AGAGGTAGAAGAGACAAAGGCAGACTCAGCACAGTCTCAGTTGCCACAGCCCCAGGATCAGTCCTCCAAG GCTGGCATGCTAGACATCTTGCACCAGAGTGGCTCTGAACTAGCCTACAAGTTGTGTCATAATGAGTGGG AGGTGGTACAGAATTCCACCCACCTGGTAGACGAGGCCGGCTCCTCAGTGGCTGTTCAGCTGCTAGAGAA CTCACACCAGGTGAGCAAAGATGGCTGTAGCTGCAGCTGCTCCTTTCAACAGTGCTACCATCTGCCATGC CGCCACATTTTGGCTCTGTTGCATACCAGCCAGCAGCCAGTAGGGGAAGCCATGGTGTGCTGCCGGTGGC AGAAGAAATACCAGCACCTCCTTGACCCCAATGGGGAGCTGCAAGACCGTGGAATCATCCCAAACACAGA TCAGCCTGAAAAGCAAGGTCAGAACCACATGATTCGGGACCTAAGCAGGGAGCTGGCAAACCTGCTGATG CAGACCGAGGGGCCAGAGCTGGAGGAGCGCTGCTCCACCCTGCGCAAGATTGTGGACATCTGGGCAGACC CCTATCAGCTGCCTGAGTCCAGTCAGCAGCCAGTTGACTTCAGAGACGTGGGCTGCCTCCCTTTCCTCTG GGGAAAGCTAGAGGAAGCAGACAGCCCCCCTCTTGCTGAAGCCATGGTTCATGATTGA
Translation (695 aa): MELGSCFKTYEDFKECFSAYKKETRCSFIVRDCISVRFHNLNNGTSFREDILYVQVKFVCIRTQSNRKKT RKVDRCPAYLLLQYNETLDRLFISELNTQHIHADSNASGGIPASKPQAICLHKLPPVQLSIRKDLDTAEK PSVEPSFCLDKIHKPSNPEQEGISPSDMAKIAKVMKNFLTVDEGSMASFSVGTSQDLDRLSFQSSKMSDL FARFPETLLLHRVENSQGHILYAFLVENKERESRVVHFAVLKAETAPSVAKMLNIFTEFNSDWPKVKMVF VDPSFPHRAILQEIFPSARTLLSIYHTTRLLEKKLHQSSVNASFKRLMKEALREAVFVSSDASLKNLCEM SQVLLDEELFSFLQAHWFSCELLWYIHVRKGLHACNTYMDSLDIVTSKVSSLFREQRSLLDCILHFVDYI DFFNTKGLKSLPTNAPKLRRTRLPSTPPRPKKPFRICGGGDTRLPVEEVEETKADSAQSQLPQPQDQSSK AGMLDILHQSGSELAYKLCHNEWEVVQNSTHLVDEAGSSVAVQLLENSHQVSKDGCSCSCSFQQCYHLPC RHILALLHTSQQPVGEAMVCCRWQKKYQHLLDPNGELQDRGIIPNTDQPEKQGQNHMIRDLSRELANLLM QTEGPELEERCSTLRKIVDIWADPYQLPESSQQPVDFRDVGCLPFLWGKLEEADSPPLAEAMVHD
|