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Report for CCDS14374.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14374.1 Public Homo sapiens X UBQLN2 24 110 108 CCDS HistoryNCBI Gene:29978Re-query CCDS DB by CCDS ID:14374.1See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14374.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000338222.7 ENSP00000345195.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000338222.7Link to Ensembl Protein Viewer:ENSP00000345195.5Re-query CCDS DB by Nucleotide ID:ENST00000338222Re-query CCDS DB by Protein ID:ENSP00000345195
Original member Current member NCBI NM_013444.4 NP_038472.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_013444.4Link to Protein Sequence:NP_038472.2Re-query CCDS DB by Nucleotide ID:NM_013444Re-query CCDS DB by Protein ID:NP_038472Link to BLAST:NP_038472.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_038472.2 624 Q9UHD9 624 100% 0 0

Chromosomal Locations for CCDS 14374.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 56563874 56565748 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1875 nt):
ATGGCTGAGAATGGCGAGAGCAGCGGCCCCCCGCGCCCCTCCCGCGGCCCTGCTGCGGCCCAAGGCTCGG
CTGCTGCCCCGGCTGAGCCTAAAATCATCAAAGTCACGGTGAAGACTCCCAAAGAGAAAGAGGAGTTCGC
GGTGCCCGAGAACAGCTCGGTTCAGCAGTTTAAGGAAGCGATTTCGAAACGCTTCAAATCCCAAACCGAT
CAGCTAGTGCTGATTTTTGCCGGAAAAATCTTAAAAGATCAAGATACCTTGATCCAGCATGGCATCCATG
ATGGGCTGACTGTTCACCTTGTCATCAAAAGCCAGAACCGACCTCAGGGCCAGTCCACGCAGCCTAGCAA
TGCCGCGGGAACTAACACTACCTCGGCGTCGACTCCCAGGAGTAACTCCACACCTATTTCCACAAATAGC
AACCCGTTTGGGTTGGGGAGCCTGGGAGGACTTGCAGGCCTTAGCAGCCTGGGCTTGAGCTCGACCAACT
TCTCTGAGCTCCAGAGCCAGATGCAGCAGCAGCTTATGGCCAGCCCTGAGATGATGATCCAAATAATGGA
AAATCCCTTTGTTCAGAGCATGCTTTCGAATCCCGATCTGATGAGGCAGCTCATTATGGCTAATCCACAG
ATGCAGCAATTGATTCAGAGAAACCCAGAAATCAGTCACCTGCTCAACAACCCAGACATAATGAGGCAGA
CACTCGAAATTGCCAGGAATCCAGCCATGATGCAAGAGATGATGAGAAATCAAGACCTGGCTCTTAGCAA
TCTAGAAAGCATCCCAGGTGGCTATAATGCTTTACGGCGCATGTACACTGACATTCAAGAGCCGATGCTG
AATGCCGCACAAGAGCAGTTTGGGGGTAATCCATTTGCCTCCGTGGGGAGTAGTTCCTCCTCTGGGGAAG
GTACGCAGCCTTCCCGCACAGAAAATCGCGATCCACTACCCAATCCATGGGCACCACCGCCAGCTACCCA
GAGTTCTGCAACTACCAGCACGACCACAAGCACTGGTAGTGGGTCTGGCAATAGTTCCAGCAATGCTACT
GGGAACACCGTTGCTGCCGCTAATTATGTCGCCAGCATCTTTAGTACCCCAGGCATGCAGAGCCTGCTGC
AACAGATAACTGAAAACCCCCAGCTGATTCAGAATATGCTGTCGGCGCCCTACATGAGAAGCATGATGCA
GTCGCTGAGCCAGAATCCAGATTTGGCTGCACAGATGATGCTGAATAGCCCGCTGTTTACTGCAAATCCT
CAGCTGCAGGAGCAGATGCGGCCACAGCTCCCAGCCTTCCTGCAGCAGATGCAGAATCCAGACACACTAT
CAGCCATGTCAAACCCAAGAGCAATGCAGGCTTTAATGCAGATCCAGCAGGGGCTACAGACATTAGCCAC
TGAAGCACCTGGCCTGATTCCGAGCTTCACTCCAGGTGTGGGGGTGGGGGTGCTGGGAACCGCTATAGGC
CCTGTAGGCCCAGTCACCCCCATAGGCCCCATAGGCCCTATAGTCCCTTTTACCCCCATAGGCCCCATTG
GGCCCATAGGACCCACTGGCCCTGCAGCCCCCCCTGGCTCCACCGGCTCTGGTGGCCCCACGGGGCCTAC
TGTGTCCAGCGCTGCACCTAGTGAAACCACGAGTCCTACATCAGAATCTGGACCCAACCAGCAGTTCATT
CAGCAAATGGTGCAGGCCCTGGCTGGAGCAAATGCTCCACAGCTGCCGAATCCAGAAGTCAGATTTCAGC
AACAACTGGAACAGCTCAACGCAATGGGGTTCTTAAACCGTGAAGCAAACTTGCAGGCCCTAATAGCAAC
AGGAGGCGACATCAATGCAGCCATTGAAAGGCTGCTGGGCTCCCAGCCATCGTAA

Translation (624 aa):
MAENGESSGPPRPSRGPAAAQGSAAAPAEPKIIKVTVKTPKEKEEFAVPENSSVQQFKEAISKRFKSQTD
QLVLIFAGKILKDQDTLIQHGIHDGLTVHLVIKSQNRPQGQSTQPSNAAGTNTTSASTPRSNSTPISTNS
NPFGLGSLGGLAGLSSLGLSSTNFSELQSQMQQQLMASPEMMIQIMENPFVQSMLSNPDLMRQLIMANPQ
MQQLIQRNPEISHLLNNPDIMRQTLEIARNPAMMQEMMRNQDLALSNLESIPGGYNALRRMYTDIQEPML
NAAQEQFGGNPFASVGSSSSSGEGTQPSRTENRDPLPNPWAPPPATQSSATTSTTTSTGSGSGNSSSNAT
GNTVAAANYVASIFSTPGMQSLLQQITENPQLIQNMLSAPYMRSMMQSLSQNPDLAAQMMLNSPLFTANP
QLQEQMRPQLPAFLQQMQNPDTLSAMSNPRAMQALMQIQQGLQTLATEAPGLIPSFTPGVGVGVLGTAIG
PVGPVTPIGPIGPIVPFTPIGPIGPIGPTGPAAPPGSTGSGGPTGPTVSSAAPSETTSPTSESGPNQQFI
QQMVQALAGANAPQLPNPEVRFQQQLEQLNAMGFLNREANLQALIATGGDINAAIERLLGSQPS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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