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Report for CCDS11063.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
11063.1 Public Homo sapiens 17 CAMTA2 24 110 108 CCDS HistoryNCBI Gene:23125Re-query CCDS DB by CCDS ID:11063.1Re-query CCDS DB by GeneID:23125See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 11063.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000348066.8 ENSP00000321813.7 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000348066.8Link to Ensembl Protein Viewer:ENSP00000321813.7Re-query CCDS DB by Nucleotide ID:ENST00000348066Re-query CCDS DB by Protein ID:ENSP00000321813
Original member Current member NCBI NM_015099.4 NP_055914.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_015099.4Link to Protein Sequence:NP_055914.2Re-query CCDS DB by Nucleotide ID:NM_015099Re-query CCDS DB by Protein ID:NP_055914Link to BLAST:NP_055914.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_055914.2 1202 O94983-1 1202 100% 0 0

Chromosomal Locations for CCDS 11063.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 4968756 4968819 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 4968907 4968981 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 4969150 4969337 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 4969500 4969520 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 4969630 4969701 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 4969902 4970085 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 4970340 4970536 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 4972232 4972536 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 4972769 4972991 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 4973175 4973253 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 4973585 4973769 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 4974385 4974500 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 4977058 4977192 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 4978504 4978630 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 4979684 4980621 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 4981225 4981359 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 4981678 4981831 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 4982089 4982160 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 4982757 4982892 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 4982976 4983043 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 4985880 4985983 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 4986192 4986222 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3609 nt):
ATGAATACCAAGGACACCACCGAGGTTGCTGAAAACAGCCACCACCTGAAGATCTTTCTCCCCAAGAAGC
TGCTGGAGTGTCTTCCTCGCTGCCCGCTGCTGCCTCCAGAGAGGCTACGGTGGAATACAAATGAGGAGAT
TGCATCCTACCTGATCACCTTTGAGAAGCATGATGAGTGGCTGTCTTGTGCCCCAAAGACAAGGCCTCAG
AATGGCTCCATCATCCTCTACAATCGCAAGAAGGTGAAATATCGGAAGGATGGTTACCTCTGGAAGAAGC
GGAAGGATGGGAAGACCACCCGAGAGGACCACATGAAGCTGAAGGTCCAGGGCATGGAGTGTCTCTATGG
CTGCTACGTTCACTCTTCCATCGTCCCCACATTCCATCGGCGCTGCTACTGGCTGCTCCAGAACCCTGAC
ATCGTCCTTGTGCACTACCTGAACGTCCCAGCCCTGGAGGACTGTGGAAAGGGCTGCAGCCCCATCTTTT
GTTCCATCAGCAGCGACCGTCGAGAGTGGCTGAAGTGGTCCCGGGAGGAGTTGTTGGGACAGCTGAAGCC
CATGTTTCATGGCATCAAGTGGAGCTGCGGGAATGGAACAGAAGAGTTCTCTGTAGAACACCTGGTGCAG
CAGATTTTGGACACCCACCCAACCAAGCCTGCTCCCCGAACCCACGCCTGTCTCTGCAGTGGGGGGCTTG
GTTCTGGGAGCCTTACCCACAAATGCAGCAGCACGAAACACCGCATCATCTCTCCCAAAGTGGAGCCCCG
AGCTTTAACCCTGACCTCTATCCCCCACGCTCACCCCCCAGAGCCTCCTCCACTGATAGCCCCACTTCCC
CCAGAGCTCCCCAAGGCACACACCTCCCCATCTTCTTCCTCTTCTTCCTCCTCATCAGGTTTTGCAGAGC
CCCTAGAAATCAGACCTAGCCCTCCCACTTCTCGAGGGGGTTCTTCAAGAGGAGGCACTGCTATCCTCCT
CCTGACAGGACTGGAGCAGCGGGCTGGAGGCTTGACGCCCACCAGGCACTTGGCTCCACAGGCTGATCCT
AGGCCTTCCATGAGTTTGGCAGTGGTTGTAGGCACTGAGCCTTCTGCCCCACCAGCTCCTCCCAGTCCTG
CCTTTGACCCTGATCGTTTTCTCAACAGCCCCCAGAGGGGCCAGACATATGGAGGGGGGCAGGGAGTAAG
CCCAGACTTCCCCGAGGCAGAGGCCGCTCATACCCCCTGTTCTGCCCTAGAGCCTGCTGCTGCCCTGGAG
CCCCAGGCAGCTGCTCGGGGTCCCCCACCACAGTCAGTAGCAGGTGGGAGAAGAGGAAACTGCTTCTTCA
TCCAAGATGATGACAGTGGGGAGGAGCTCAAGGGTCACGGGGCTGCCCCACCCATACCTTCACCCCCTCC
CTCACCCCCACCCTCACCTGCCCCCTTGGAGCCGTCAAGCAGGGTAGGAAGAGGAGAGGCCTTGTTTGGA
GGACCTGTTGGGGCCAGTGAACTGGAGCCCTTCAGTCTTTCATCATTCCCAGACCTTATGGGAGAACTCA
TCAGTGACGAAGCTCCAAGCATCCCTGCTCCGACCCCCCAGCTGTCTCCTGCTCTTAGCACCATCACAGA
CTTCTCCCCAGAGTGGTCCTACCCAGAGGGTGGGGTCAAGGTGCTCATCACAGGTCCTTGGACCGAAGCC
GCCGAGCATTACTCCTGTGTCTTTGATCACATCGCAGTGCCAGCCTCACTTGTCCAGCCTGGTGTCTTAC
GCTGCTACTGTCCCGCCCATGAGGTAGGGCTGGTGTCTTTGCAGGTGGCAGGGCGGGAGGGGCCCCTTTC
TGCTTCTGTGCTCTTTGAGTATCGAGCCCGCCGATTCCTGTCTCTGCCTAGTACTCAACTTGACTGGCTG
TCACTGGACGACAACCAGTTCCGGATGTCCATACTAGAGCGACTGGAGCAGATGGAGAAGCGGATGGCAG
AGATCGCAGCAGCTGGGCAGGTGCCTTGCCAGGGTCCTGATGCTCCTCCAGTTCAGGATGAAGGCCAGGG
GCCTGGGTTCGAAGCACGGGTAGTGGTCTTGGTAGAAAGCATGATCCCACGCTCCACCTGGAAGGGTCCT
GAACGTCTGGCCCATGGAAGCCCCTTCCGGGGCATGAGCCTTCTGCACCTGGCTGCTGCCCAGGGCTATG
CCCGCCTCATCGAGACCCTGAGCCAGTGGCGGAGTGTGGAGACTGGAAGCTTGGACTTAGAGCAGGAGGT
TGACCCGCTCAACGTGGATCATTTCTCTTGCACCCCTCTGATGTGGGCTTGTGCCCTGGGACACCTGGAA
GCTGCTGTGCTCCTTTTCCGTTGGAACCGACAGGCACTGAGCATTCCCGACTCTCTGGGCCGTCTGCCAT
TGTCTGTGGCTCATTCCCGGGGTCATGTGCGCCTTGCCCGCTGCCTTGAGGAACTACAGAGACAGGAGCC
TTCGGTGGAGCCCCCATTTGCCCTATCGCCACCCTCCTCCAGCCCAGACACTGGTCTGAGCAGCGTCTCC
TCGCCCTCGGAGCTGTCGGATGGCACCTTTTCCGTCACGTCAGCCTATTCTAGTGCCCCAGATGGCAGTC
CCCCCCCTGCACCTCTGCCAGCCTCTGAGATGACTATGGAGGACATGGCCCCAGGCCAGCTTTCCTCTGG
TGTCCCAGAAGCCCCCCTACTCCTCATGGACTATGAGGCTACCAACTCCAAGGGGCCCCTCTCCTCCCTT
CCTGCCCTCCCACCAGCTTCAGATGATGGGGCTGCTCCAGAGGACGCTGACAGCCCACAGGCTGTGGATG
TGATCCCGGTGGACATGATCTCACTAGCCAAGCAGATCATCGAAGCCACACCGGAGCGGATTAAACGAGA
GGACTTCGTGGGGCTGCCCGAGGCTGGAGCCTCAATGCGGGAGCGGACAGGGGCTGTGGGGCTCAGTGAG
ACCATGTCCTGGCTGGCCAGCTACCTGGAGAATGTGGACCATTTCCCCAGCTCAACCCCTCCCAGCGAAC
TGCCCTTTGAGCGAGGTCGCCTGGCTGTCCCTTCAGCACCCTCCTGGGCAGAGTTTCTCTCTGCATCCAC
CAGTGGCAAGATGGAAAGTGATTTTGCCCTGCTGACACTATCAGATCACGAGCAGCGGGAACTGTATGAG
GCTGCCCGAGTCATCCAGACGGCCTTCCGAAAGTACAAGGGCCGGCGGCTGAAGGAGCAGCAGGAGGTAG
CAGCAGCTGTAATCCAGCGCTGTTACCGGAAGTACAAGCAGCTGACCTGGATTGCACTTAAGTTTGCACT
CTATAAGAAGATGACCCAGGCGGCCATCCTGATCCAGAGCAAGTTCCGAAGCTACTATGAACAGAAGCGA
TTTCAGCAGAGCCGCCGAGCGGCTGTGCTCATCCAGCAGCACTACCGCTCCTACCGCCGCAGGCCCGGCC
CTCCCCACCGGACTTCGGCCACCCTGCCTGCCCGCAACAAAGGCTCCTTTCTCACCAAGAAGCAGGACCA
GGCAGCCCGGAAGATCATGAGATTCCTGCGGCGCTGCCGACACAGGATGAGGGAACTGAAGCAGAACCAG
GAGCTGGAAGGGCTTCCCCAGCCGGGACTGGCCACATGA

Translation (1202 aa):
MNTKDTTEVAENSHHLKIFLPKKLLECLPRCPLLPPERLRWNTNEEIASYLITFEKHDEWLSCAPKTRPQ
NGSIILYNRKKVKYRKDGYLWKKRKDGKTTREDHMKLKVQGMECLYGCYVHSSIVPTFHRRCYWLLQNPD
IVLVHYLNVPALEDCGKGCSPIFCSISSDRREWLKWSREELLGQLKPMFHGIKWSCGNGTEEFSVEHLVQ
QILDTHPTKPAPRTHACLCSGGLGSGSLTHKCSSTKHRIISPKVEPRALTLTSIPHAHPPEPPPLIAPLP
PELPKAHTSPSSSSSSSSSGFAEPLEIRPSPPTSRGGSSRGGTAILLLTGLEQRAGGLTPTRHLAPQADP
RPSMSLAVVVGTEPSAPPAPPSPAFDPDRFLNSPQRGQTYGGGQGVSPDFPEAEAAHTPCSALEPAAALE
PQAAARGPPPQSVAGGRRGNCFFIQDDDSGEELKGHGAAPPIPSPPPSPPPSPAPLEPSSRVGRGEALFG
GPVGASELEPFSLSSFPDLMGELISDEAPSIPAPTPQLSPALSTITDFSPEWSYPEGGVKVLITGPWTEA
AEHYSCVFDHIAVPASLVQPGVLRCYCPAHEVGLVSLQVAGREGPLSASVLFEYRARRFLSLPSTQLDWL
SLDDNQFRMSILERLEQMEKRMAEIAAAGQVPCQGPDAPPVQDEGQGPGFEARVVVLVESMIPRSTWKGP
ERLAHGSPFRGMSLLHLAAAQGYARLIETLSQWRSVETGSLDLEQEVDPLNVDHFSCTPLMWACALGHLE
AAVLLFRWNRQALSIPDSLGRLPLSVAHSRGHVRLARCLEELQRQEPSVEPPFALSPPSSSPDTGLSSVS
SPSELSDGTFSVTSAYSSAPDGSPPPAPLPASEMTMEDMAPGQLSSGVPEAPLLLMDYEATNSKGPLSSL
PALPPASDDGAAPEDADSPQAVDVIPVDMISLAKQIIEATPERIKREDFVGLPEAGASMRERTGAVGLSE
TMSWLASYLENVDHFPSSTPPSELPFERGRLAVPSAPSWAEFLSASTSGKMESDFALLTLSDHEQRELYE
AARVIQTAFRKYKGRRLKEQQEVAAAVIQRCYRKYKQLTWIALKFALYKKMTQAAILIQSKFRSYYEQKR
FQQSRRAAVLIQQHYRSYRRRPGPPHRTSATLPARNKGSFLTKKQDQAARKIMRFLRRCRHRMRELKQNQ
ELEGLPQPGLAT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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