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Report for CCDS14490.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14490.1 Public Homo sapiens X ARMCX2 24 110 108 CCDS HistoryNCBI Gene:9823Re-query CCDS DB by CCDS ID:14490.1Re-query CCDS DB by GeneID:9823See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14490.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000330154.6 ENSP00000328631.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000330154.6Link to Ensembl Protein Viewer:ENSP00000328631.2Re-query CCDS DB by Nucleotide ID:ENST00000330154Re-query CCDS DB by Protein ID:ENSP00000328631
Original member Current member EBI ENST00000328766.9 ENSP00000331662.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000328766.9Link to Ensembl Protein Viewer:ENSP00000331662.5Re-query CCDS DB by Nucleotide ID:ENST00000328766Re-query CCDS DB by Protein ID:ENSP00000331662
Original member Current member EBI ENST00000356824.9 ENSP00000349281.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000356824.9Link to Ensembl Protein Viewer:ENSP00000349281.4Re-query CCDS DB by Nucleotide ID:ENST00000356824Re-query CCDS DB by Protein ID:ENSP00000349281
Original member Current member NCBI NM_001282231.2 NP_001269160.1 Accepted alive Link to Nucleotide Sequence:NM_001282231.2Link to Protein Sequence:NP_001269160.1Re-query CCDS DB by Nucleotide ID:NM_001282231Re-query CCDS DB by Protein ID:NP_001269160Link to BLAST:NP_001269160.1
Original member Current member NCBI NM_014782.7 NP_055597.1 Accepted alive Link to Nucleotide Sequence:NM_014782.7Link to Protein Sequence:NP_055597.1Re-query CCDS DB by Nucleotide ID:NM_014782Re-query CCDS DB by Protein ID:NP_055597Link to BLAST:NP_055597.1
Original member Current member NCBI NM_177949.4 NP_808818.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_177949.4Link to Protein Sequence:NP_808818.1Re-query CCDS DB by Nucleotide ID:NM_177949Re-query CCDS DB by Protein ID:NP_808818Link to BLAST:NP_808818.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001269160.1 632 Q7L311 632 100% 0 0
NP_055597.1 632 Q7L311 632 100% 0 0
NP_808818.1 632 Q7L311 632 100% 0 0

Chromosomal Locations for CCDS 14490.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 101655690 101657588 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1899 nt):
ATGAGCCGCGTTCGGGATGCTGGCTGTGTAGCGGCGGGGATAGTGATAGGGGCTGGTGCCTGGTACTGTG
TC
TACAAATACACCAGGGGGAGAGACCAGACCAAGAAGAGAATGGCCAAGCCCAAAAACCGGGCTGTGGC
T
GGGACTGGAGCCAGGGCTAGAGCTGGGCTAAGAGCCGGATTCACAATCGACCTTGGGTCAGGATTCAGT
CCC
CCAACCCCAGTCCGTGCTGAAGCAGAGGACAGGGCCCAGGATGAAGCCTCTGCTCTGGACACAGTTG
GA
GCTGAGGCAGTGGCCCCAGCTGCATCCAGCGCTGAGGCTCAGAGTGGGGCAGGCAGTCAGGCCCAAGA
G
GCAGATGGAGCCGGGGTTGGGCCTAAGGCCGAATCAGTAGTTGGGGCTGCAATGGCTTCTGCAATAGCA
CCA
CCTCCCGGGGTGACAGAGGCCCTTGGGGCTGCAGAAGCCCCTGCAATGGCAGGGGCTCCCAAAGTGG
CA
GAAGCTCCCAGAGAAGCGGAGACTTCCAGGGCAGCGGTGCCTCCTGGGACAGTGGTGCCTACCGAAGC
G
GCAGCACCCACTGAGGTGACCGAGGGTCCTGGGGTAGCAGCACCTACCAAGGTAGCTGAAGCTCCCGGG
GTG
GCATCGCCTACCGAGGCAGCTGAGGCTCCTGTGCCGGCAACGCCTACTGGGGCTGCAGCACCTACTG
GG
GCTGCAGAGTCTCCTGGAACTTCTGGTTCCCCTAGAACAGCGGTGGTTCCTGGAACATCAGCTGCCAA
G
AAAGCAACCCCTGGGGCTCACACTGGGGCTATACCGAAAGCCACATCAGCGACTGGAGCGGTACCCAAA
GGT
GGAGGCAAGGGTGTAACCAGGTCCCGGAATGGGGGCAAGGGCAAGGGCAAGAAAAGCAAAGTTGAAG
TA
GACGAACTGGGGATGGGCTTCCGTCCTGGAGATGGGGCTGCAGCAGCTGCTGCAGCCTCTGCTAATGG
C
GGACAGGCTTTCCTGGCAGAGGTCCCTGATTCTGAGGAAGGGGAGTCCGGGTGGACTGACACAGAGTCA
GAT
TCAGACTCTGAGCCCGAGACCCAGCGCAGAGGGAGGGGAAGAAGACCCGTTGCCATGCAGAAGCGCC
CC
TTTCCTTATGAAATTGATGAGATTCTGGGTGTCCGCGATCTCAGGAAGGTCCTTGCCTTGCTTCAGAA
A
TCTGATGATCCTTTCATCCAACAGGTAGCTTTGCTCACTCTGAGCAACAATGCCAATTATTCATGCAAT
CAA
GAGACAATCCGCAAATTGGGAGGCCTCCCAATTATTGCAAACATGATCAACAAAACTGATCCACACA
TT
AAGGAAAAAGCCTTAATGGCCATGAATAACCTGAGTGAGAATTATGAAAATCAGGGCCGGCTTCAGGT
G
TACATGAATAAAGTGATGGATGATATCATGGCCTCTAACCTGAACTCAGCAGTTCAAGTAGTTGGACTA
AAA
TTTCTAACAAACATGACTATTACTAATGACTACCAACACCTGCTTGTCAATTCCATTGCAAACTTTT
TC
CGTTTGCTATCTCAGGGAGGTGGAAAAATCAAGGTTGAGATTTTGAAAATCCTTTCGAATTTTGCTGA
A
AATCCAGATATGTTGAAGAAACTTCTCAGTACCCAAGTGCCAGCATCATTTAGTTCCCTCTATAATTCT
TAC
GTGGAATCAGAAATCCTTATTAATGCCCTTACTCTATTTGAGATTATCTATGACAATCTCAGAGCAG
AA
GTGTTTAACTATAGAGAATTCAATAAAGGTTCCCTTTTTTACTTATGCACTACATCTGGAGTGTGTGT
T
AAGAAAATTAGAGCCTTAGCAAATCACCATGACCTCTTAGTGAAAGTGAAAGTTATAAAACTAGTGAAC
AAA
TTCTGA


Translation (632 aa):
MSRVRDAGCVAAGIVIGAGAWYCVYKYTRGRDQTKKRMAKPKNRAVAGTGARARAGLRAGFTIDLGSGFS
P
PTPVRAEAEDRAQDEASALDTVGAEAVAPAASSAEAQSGAGSQAQEADGAGVGPKAESVVGAAMASAIA
P
PPGVTEALGAAEAPAMAGAPKVAEAPREAETSRAAVPPGTVVPTEAAAPTEVTEGPGVAAPTKVAEAPG
V
ASPTEAAEAPVPATPTGAAAPTGAAESPGTSGSPRTAVVPGTSAAKKATPGAHTGAIPKATSATGAVPK
G
GGKGVTRSRNGGKGKGKKSKVEVDELGMGFRPGDGAAAAAAASANGGQAFLAEVPDSEEGESGWTDTES
D
SDSEPETQRRGRGRRPVAMQKRPFPYEIDEILGVRDLRKVLALLQKSDDPFIQQVALLTLSNNANYSCN
Q
ETIRKLGGLPIIANMINKTDPHIKEKALMAMNNLSENYENQGRLQVYMNKVMDDIMASNLNSAVQVVGL
K
FLTNMTITNDYQHLLVNSIANFFRLLSQGGGKIKVEILKILSNFAENPDMLKKLLSTQVPASFSSLYNS
Y
VESEILINALTLFEIIYDNLRAEVFNYREFNKGSLFYLCTTSGVCVKKIRALANHHDLLVKVKVIKLVN
K
F




Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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