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Report for CCDS36945.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
36945.1 Public Mus musculus 14 Defb47 23 108 98 CCDS HistoryNCBI Gene:654465Re-query CCDS DB by CCDS ID:36945.1Re-query CCDS DB by GeneID:654465See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 36945.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000100492.4 ENSMUSP00000098061.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000100492.4Link to Ensembl Protein Viewer:ENSMUSP00000098061.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000100492Re-query CCDS DB by Protein ID:ENSMUSP00000098061
Original member Current member NCBI NM_001039125.2 NP_001034214.1 Accepted alive Link to Nucleotide Sequence:NM_001039125.2Link to Protein Sequence:NP_001034214.1Re-query CCDS DB by Nucleotide ID:NM_001039125Re-query CCDS DB by Protein ID:NP_001034214Link to BLAST:NP_001034214.1

Chromosomal Locations for CCDS 36945.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 14 (NC_000080.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 62998102 62998159 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 63000885 63001066 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (240 nt):
ATGCGATCCCGTTCCTTCCTGCCTGTCCTCTTCCTCTTTGTGATGATGATGCTGAGAGGAAAGGCTGGCC
TTGTCCCAGGGGAAAAGCAGTGCATTTCGTTGAAAGGAATATGCAAAGACCTAGCGTGCACATCCTCAGA
CGATACTATTGGCGTATGTAACGACGTGAAGAAGTGTTGTAGGAAGTGGTGGGTGTTTGAACCCTACCCA
ACACCCGTTCCCAAAGGAAAGTCTCCTTAG

Translation (79 aa):
MRSRSFLPVLFLFVMMMLRGKAGLVPGEKQCISLKGICKDLACTSSDDTIGVCNDVKKCCRKWWVFEPYP
TPVPKGKSP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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