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Report for CCDS54052.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
54052.1 Public Homo sapiens 16 BANP 24 110 108 CCDS HistoryNCBI Gene:54971Re-query CCDS DB by CCDS ID:54052.1Re-query CCDS DB by GeneID:54971See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 54052.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000538234.5 ENSP00000444352.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000538234.5Link to Ensembl Protein Viewer:ENSP00000444352.1Re-query CCDS DB by Nucleotide ID:ENST00000538234Re-query CCDS DB by Protein ID:ENSP00000444352
Original member Current member NCBI NM_001173542.1 NP_001167013.1 Accepted alive Link to Nucleotide Sequence:NM_001173542.1Link to Protein Sequence:NP_001167013.1Re-query CCDS DB by Nucleotide ID:NM_001173542Re-query CCDS DB by Protein ID:NP_001167013Link to BLAST:NP_001167013.1
Original member Current member NCBI NM_001384925.1 NP_001371854.1 Accepted alive Link to Nucleotide Sequence:NM_001384925.1Link to Protein Sequence:NP_001371854.1Re-query CCDS DB by Nucleotide ID:NM_001384925Re-query CCDS DB by Protein ID:NP_001371854Link to BLAST:NP_001371854.1
Original member Current member NCBI NM_001384926.1 NP_001371855.1 Accepted alive Link to Nucleotide Sequence:NM_001384926.1Link to Protein Sequence:NP_001371855.1Re-query CCDS DB by Nucleotide ID:NM_001384926Re-query CCDS DB by Protein ID:NP_001371855Link to BLAST:NP_001371855.1
Original member Current member NCBI NM_001384927.1 NP_001371856.1 Accepted alive Link to Nucleotide Sequence:NM_001384927.1Link to Protein Sequence:NP_001371856.1Re-query CCDS DB by Nucleotide ID:NM_001384927Re-query CCDS DB by Protein ID:NP_001371856Link to BLAST:NP_001371856.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001167013.1 508 Q8N9N5-7 508 100% 0 0
NP_001371854.1 508 Q8N9N5-7 508 100% 0 0
NP_001371855.1 508 Q8N9N5-7 508 100% 0 0
NP_001371856.1 508 Q8N9N5-7 508 100% 0 0

Chromosomal Locations for CCDS 54052.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 87975116 87975185 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 87981036 87981127 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 87984060 87984259 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 88004295 88004411 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 88006090 88006265 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 88018428 88018667 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 88027483 88027650 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 88033109 88033245 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 88035323 88035394 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 88037973 88038011 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 88072069 88072212 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 88076590 88076661 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1527 nt):
ATGATGTCGGAACACGACCTGGCCGATGTGGTTCAGATTGCAGTGGAAGACCTGAGCCCTGACCACCCAG
TTGTTTTGGAGAATCATGTAGTGACAGATGAAGACGAACCTGCTTTGAAACGCCAGCGACTAGAAATCAA
TTGCCAGGATCCATCTATAAAGTCATTCCTGTATTCCATCAACCAGACAATCTGCTTGCGGTTGGATAGC
ATTGAAGCCAAATTGCAAGCCCTGGAGGCTACTTGTAAATCCTTAGAAGAAAAGCTGGATCTGGTCACGA
ACAAGCAGCACAGCCCCATCCAGGTCCCCATGGTGGCCGGCTCCCCTCTCGGGGCAACCCAGACGTGCAA
CAAAGTGCGATGCGTCGTCCCCCAGACTACAGTAATACTCAACAATGATCGGCAGAACGCCATTGTAGCC
AAGATGGAAGACCCCTTGAGCAACAGGGCACCGGATTCCCTGGAAAATGTCATTAGCAACGCTGTGCCTG
GGCGTCGGCAGAACACCATTGTGGTGAAGGTGCCGGGCCAAGAAGACAGCCACCACGAGGACGGGGAGAG
CGGCTCGGAGGCCAGCGACTCTGTGTCCAGCTGTGGGCAGGCGGGCAGTCAGAGCATCGGGAGCAACGTC
ACGCTCATCACCCTGAACTCGGAAGAGGACTACCCCAATGGCACCTGGCTGGGCGACGAGAACAACCCCG
AGATGCGGGTACGCTGCGCCATCATCCCCTCCGACATGCTGCACATCAGCACCAACTGCCGCACGGCCGA
GAAGATGGCGCTCACGCTGCTGGACTACCTCTTCCACCGCGAGGTGCAGGCTGTGTCCAACCTCTCGGGG
CAGGGCAAGCACGGGAAGAAGCAGCTGGACCCGCTCACCATCTACGGCATCCGGTGTCACCTTTTCTATA
AATTTGGCATCACAGAATCCGACTGGTACCGAATCAAGCAGAGCATCGACTCCAAGTGCCGCACGGCGTG
GCGGCGCAAGCAGCGGGGCCAGAGCCTGGCGGTCAAGAGCTTCTCGCGGAGAACGCCCAACTCGTCCTCC
TACTGCCCTTCAGAGCCGATGATGAGCACCCCACCTCCTGCCAGCGAGCTCCCGCAGCCACAGCCGCAGC
CGCAGGCCCTGCACTACGCGCTGGCCAACGCACAGCAGGTGCAGATCCACCAGATCGGAGAAGACGGACA
GGTGCAAGTAATCCCACAGGGACACCTCCACATCGCCCAGGTGCCGCAGGGGGAGCAAGTCCAGATCACG
CAGGACAGCGAGGGCAACCTCCAGATCCATCACGTGGGGCAGGACGGTCAGGTGCTGCAGGGTGCACAGC
TGATCGCCGTGGCCTCCTCGGACCCCGCGGCGGCGGGCGTGGATGGGTCGCCACTCCAGGGCAGCGACAT
CCAGGTTCAGTACGTGCAGCTGGCGCCAGTGAGTGACCACACGGCCGGGGCACAGACGGCCGAAGCCCTG
CAGCCCACGCTACAGCCGGAGATGCAGCTCGAGCACGGGGCCATCCAGATTCAGTGA

Translation (508 aa):
MMSEHDLADVVQIAVEDLSPDHPVVLENHVVTDEDEPALKRQRLEINCQDPSIKSFLYSINQTICLRLDS
IEAKLQALEATCKSLEEKLDLVTNKQHSPIQVPMVAGSPLGATQTCNKVRCVVPQTTVILNNDRQNAIVA
KMEDPLSNRAPDSLENVISNAVPGRRQNTIVVKVPGQEDSHHEDGESGSEASDSVSSCGQAGSQSIGSNV
TLITLNSEEDYPNGTWLGDENNPEMRVRCAIIPSDMLHISTNCRTAEKMALTLLDYLFHREVQAVSNLSG
QGKHGKKQLDPLTIYGIRCHLFYKFGITESDWYRIKQSIDSKCRTAWRRKQRGQSLAVKSFSRRTPNSSS
YCPSEPMMSTPPPASELPQPQPQPQALHYALANAQQVQIHQIGEDGQVQVIPQGHLHIAQVPQGEQVQIT
QDSEGNLQIHHVGQDGQVLQGAQLIAVASSDPAAAGVDGSPLQGSDIQVQYVQLAPVSDHTAGAQTAEAL
QPTLQPEMQLEHGAIQIQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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