NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS2915.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
2915.1 Public Homo sapiens 3 GPR27 24 110 108 CCDS HistoryNCBI Gene:2850Re-query CCDS DB by CCDS ID:2915.1See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 2915.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000304411.3 ENSP00000303149.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000304411.3Link to Ensembl Protein Viewer:ENSP00000303149.2Re-query CCDS DB by Nucleotide ID:ENST00000304411Re-query CCDS DB by Protein ID:ENSP00000303149
Original member Current member NCBI NM_018971.3 NP_061844.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_018971.3Link to Protein Sequence:NP_061844.1Re-query CCDS DB by Nucleotide ID:NM_018971Re-query CCDS DB by Protein ID:NP_061844Link to BLAST:NP_061844.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_061844.1 375 Q9NS67 375 100% 0 0

Chromosomal Locations for CCDS 2915.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 71754050 71755177 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1128 nt):
ATGGCGAACGCGAGCGAGCCGGGTGGCAGCGGCGGCGGCGAGGCGGCCGCCCTGGGCCTCAAGCTGGCCA
CGCTCAGCCTGCTGCTGTGCGTGAGCCTAGCGGGCAACGTGCTGTTCGCGCTGCTGATCGTGCGGGAGCG
CAGCCTGCACCGCGCCCCGTACTACCTGCTGCTCGACCTGTGCCTGGCCGACGGGCTGCGCGCGCTCGCC
TGCCTCCCGGCCGTCATGCTGGCGGCGCGGCGTGCGGCGGCCGCGGCGGGGGCGCCGCCGGGCGCGCTGG
GCTGCAAGCTGCTCGCCTTCCTGGCCGCGCTCTTCTGCTTCCACGCCGCCTTCCTGCTGCTGGGCGTGGG
CGTCACCCGCTACCTGGCCATCGCGCACCACCGCTTCTATGCAGAGCGCCTGGCCGGCTGGCCGTGCGCC
GCCATGCTGGTGTGCGCCGCCTGGGCGCTGGCGCTGGCCGCGGCCTTCCCGCCAGTGCTGGACGGCGGTG
GCGACGACGAGGACGCGCCGTGCGCCCTGGAGCAGCGGCCCGACGGCGCCCCCGGCGCGCTGGGCTTCCT
GCTGCTGCTGGCCGTGGTGGTGGGCGCCACGCACCTCGTCTACCTCCGCCTGCTCTTCTTCATCCACGAC
CGCCGCAAGATGCGGCCCGCGCGCCTGGTGCCCGCCGTCAGCCACGACTGGACCTTCCACGGCCCGGGCG
CCACCGGCCAGGCGGCCGCCAACTGGACGGCGGGCTTCGGCCGCGGGCCCACGCCGCCCGCGCTTGTGGG
CATCCGGCCCGCAGGGCCGGGCCGCGGCGCGCGCCGCCTCCTCGTGCTGGAAGAATTCAAGACGGAGAAG
AGGCTGTGCAAGATGTTCTACGCCGTCACGCTGCTCTTCCTGCTCCTCTGGGGGCCCTACGTCGTGGCCA
GCTACCTGCGGGTCCTGGTGCGGCCCGGCGCCGTCCCCCAGGCCTACCTGACGGCCTCCGTGTGGCTGAC
CTTCGCGCAGGCCGGCATCAACCCCGTCGTGTGCTTCCTCTTCAACAGGGAGCTGAGGGACTGCTTCAGG
GCCCAGTTCCCCTGCTGCCAGAGCCCCCGGACCACCCAGGCGACCCATCCCTGCGACCTGAAAGGCATTG
GTTTATGA

Translation (375 aa):
MANASEPGGSGGGEAAALGLKLATLSLLLCVSLAGNVLFALLIVRERSLHRAPYYLLLDLCLADGLRALA
CLPAVMLAARRAAAAAGAPPGALGCKLLAFLAALFCFHAAFLLLGVGVTRYLAIAHHRFYAERLAGWPCA
AMLVCAAWALALAAAFPPVLDGGGDDEDAPCALEQRPDGAPGALGFLLLLAVVVGATHLVYLRLLFFIHD
RRKMRPARLVPAVSHDWTFHGPGATGQAAANWTAGFGRGPTPPALVGIRPAGPGRGARRLLVLEEFKTEK
RLCKMFYAVTLLFLLLWGPYVVASYLRVLVRPGAVPQAYLTASVWLTFAQAGINPVVCFLFNRELRDCFR
AQFPCCQSPRTTQATHPCDLKGIGL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH