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Report for CCDS92791.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
92791.1 Public Homo sapiens 2 SH2D6 24 110 108 CCDS HistoryNCBI Gene:284948Re-query CCDS DB by CCDS ID:92791.1See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)


Attributes
Inferred exon combination

Sequence IDs included in CCDS 92791.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000469800.7 ENSP00000510308.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000469800.7Link to Ensembl Protein Viewer:ENSP00000510308.1Re-query CCDS DB by Nucleotide ID:ENST00000469800Re-query CCDS DB by Protein ID:ENSP00000510308
Original member Current member NCBI NM_001394463.1 NP_001381392.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001394463.1Link to Protein Sequence:NP_001381392.1Re-query CCDS DB by Nucleotide ID:NM_001394463Re-query CCDS DB by Protein ID:NP_001381392Link to BLAST:NP_001381392.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001381392.1 335 Q7Z4S9-3 335 100% 0 0

Chromosomal Locations for CCDS 92791.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 85429466 85429468 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 85429587 85429612 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 85429981 85430015 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 85430364 85430434 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 85430538 85430652 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 85431210 85431268 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 85431899 85431959 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 85433099 85433121 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 85433571 85433631 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 85434033 85434111 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 85434340 85434370 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 85434473 85434497 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 85435065 85435123 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 85435413 85435496 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 85435666 85435824 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 85436466 85436582 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1008 nt):
ATGGACAAGCTCAGTGGGAGCAGGCCCCGGCTGGGGCCACCGCTCCCACCCCCCAGATGTGTGGACTCCC
CAGGTTGGAGAGAAGATGCTCCCAGCCCTTCCTTCCTGCCTGCCCCAGGGACTTGGAGACACAAGGCCCA
GGAGGAGGACGAGGAGGAAAATAAGTATGAGCTGCCCCCCTGTGAGGCTCTGCCCCTCAGTCTAGCCCCT
GCCCACCTTCCTGGCACTGAGGAGGACTCCTTGTACCTGGATCACTCTGGCCCCCTGGGTCCATCAAAGC
CATCGCCACCCCTGCCTCAGCCCACCATGCTGAAGGGAGCAGTGAGCCTGCCGGTGGCCGGAAAGCAGGG
ACCTATCTTTGGGAGGCGAGAGCAGGGTGCATCGTCCAGAGTGGTGCCAGGCCCTCCAAAGAAACCTGAT
GAGGACCTCTACTTGGAATGTGAGCCGGATCCAGTCCTGGCTTTGACTCAGACTCTCAGCTTCCAAGTCC
TGATGCCCTCAGGCCCTCTGCCCAGGACATCAGTGGTGCCCAGGCCTACCACAGCCCCCCAGGAAACTCG
GAATGGAACAGCAGATGCTGCCTCTAAAGAAGGAAGGAAATCGTCTCTTCCCTCTGTAGCCCCCACTGGG
AGTGCCTCAGCTGCTGAGGACAGTGATCTGCTGACTCAGCCTTGGTACTCGGGGAACTGTGACCGCTATG
CTGTTGAGAGTGCCCTGCTCCACTTACAAAAGGATGGGGCCTATACCGTGCGCCCCAGCTCAGGGCCTCA
TGGCTCCCAGCCCTTCACCCTGGCAGTGCTTCTCCGAGGCCGGGTCTTCAACATTCCCATCCGGCGGCTG
GATGGCGGACGCCACTATGCCCTGGGCCGGGAGGGCAGGAACCGTGAGGAGCTCTTCTCCTCCGTGGCGG
CCATGGTCCAGCACTTCATGTGGCACCCTCTGCCCCTTGTGGACAGACACAGCGGCAGCCGGGAACTCAC
CTGCCTGCTCTTCCCCACCAAGCCTTGA

Translation (335 aa):
MDKLSGSRPRLGPPLPPPRCVDSPGWREDAPSPSFLPAPGTWRHKAQEEDEEENKYELPPCEALPLSLAP
AHLPGTEEDSLYLDHSGPLGPSKPSPPLPQPTMLKGAVSLPVAGKQGPIFGRREQGASSRVVPGPPKKPD
EDLYLECEPDPVLALTQTLSFQVLMPSGPLPRTSVVPRPTTAPQETRNGTADAASKEGRKSSLPSVAPTG
SASAAEDSDLLTQPWYSGNCDRYAVESALLHLQKDGAYTVRPSSGPHGSQPFTLAVLLRGRVFNIPIRRL
DGGRHYALGREGRNREELFSSVAAMVQHFMWHPLPLVDRHSGSRELTCLLFPTKP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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