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Report for CCDS31371.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31371.1 Public Homo sapiens 11 OR52E2 24 110 108 CCDS HistoryNCBI Gene:119678Re-query CCDS DB by CCDS ID:31371.1Re-query CCDS DB by GeneID:119678See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31371.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000321522.2 ENSP00000322088.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000321522.2Link to Ensembl Protein Viewer:ENSP00000322088.2Re-query CCDS DB by Nucleotide ID:ENST00000321522Re-query CCDS DB by Protein ID:ENSP00000322088
Original member Current member NCBI NM_001005164.2 NP_001005164.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001005164.2Link to Protein Sequence:NP_001005164.2Re-query CCDS DB by Nucleotide ID:NM_001005164Re-query CCDS DB by Protein ID:NP_001005164Link to BLAST:NP_001005164.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001005164.2 325 Q8NGJ4 325 100% 0 0

Chromosomal Locations for CCDS 31371.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 5058650 5059627 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (978 nt):
ATGTTCCTTCCCAATGACACCCAGTTTCACCCCTCCTCCTTCCTGTTGCTGGGGATCCCAGGACTAGAAA
CACTTCACATCTGGATCGGCTTTCCCTTCTGTGCTGTGTACATGATCGCACTCATAGGGAACTTCACTAT
TCTACTTGTGATCAAGACTGACAGCAGCCTACACCAGCCCATGTTCTACTTCCTGGCCATGTTGGCCACC
ACTGATGTGGGTCTCTCAACAGCTACCATCCCTAAGATGCTTGGAATCTTCTGGATCAACCTCAGAGGGA
TCATCTTTGAAGCCTGCCTCACCCAGATGTTTTTTATCCACAACTTCACACTTATGGAGTCAGCAGTCCT
TGTGGCAATGGCTTATGACAGCTATGTGGCCATCTGCAATCCACTCCAATATAGCGCCATCCTCACCAAC
AAGGTTGTTTCTGTGATTGGTCTTGGTGTGTTTGTGAGGGCTTTAATTTTCGTCATTCCCTCTATACTTC
TTATATTGCGGTTGCCCTTCTGTGGGAATCATGTAATTCCCCACACCTACTGTGAGCACATGGGTCTTGC
TCATCTATCTTGTGCCAGCATCAAAATCAATATTATTTATGGTTTATGTGCCATTTGTAATCTAGTGTTT
GACATCACAGTCATTGCCCTTTCTTATGTGCATATTCTTTGTGCTGTTTTCCGTCTTCCTACTCATGAAG
CCCGACTCAAGTCCCTCAGCACATGTGGTTCACATGTGTGTGTAATCCTTGCCTTCTATACACCAGCCCT
CTTTTCCTTTATGACTCATCGCTTTGGCCGAAATGTGCCCCGCTATATCCATATACTCCTAGCCAATCTC
TATGTTGTGGTGCCACCAATGCTCAATCCTGTCATATATGGAGTCAGAACCAAGCAGATCTATAAATGTG
TGAAGAAAATATTATTGCAGGAACAAGGAATGGAAAAGGAAGAGTACCTAATACATACGAGGTTCTGA

Translation (325 aa):
MFLPNDTQFHPSSFLLLGIPGLETLHIWIGFPFCAVYMIALIGNFTILLVIKTDSSLHQPMFYFLAMLAT
TDVGLSTATIPKMLGIFWINLRGIIFEACLTQMFFIHNFTLMESAVLVAMAYDSYVAICNPLQYSAILTN
KVVSVIGLGVFVRALIFVIPSILLILRLPFCGNHVIPHTYCEHMGLAHLSCASIKINIIYGLCAICNLVF
DITVIALSYVHILCAVFRLPTHEARLKSLSTCGSHVCVILAFYTPALFSFMTHRFGRNVPRYIHILLANL
YVVVPPMLNPVIYGVRTKQIYKCVKKILLQEQGMEKEEYLIHTRF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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