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Report for CCDS2931.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
2931.1 Public Homo sapiens 3 GPR15 24 110 108 CCDS HistoryNCBI Gene:2838Re-query CCDS DB by CCDS ID:2931.1See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 2931.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000284311.5 ENSP00000284311.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000284311.5Link to Ensembl Protein Viewer:ENSP00000284311.3Re-query CCDS DB by Nucleotide ID:ENST00000284311Re-query CCDS DB by Protein ID:ENSP00000284311
Original member Current member NCBI NM_005290.4 NP_005281.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_005290.4Link to Protein Sequence:NP_005281.1Re-query CCDS DB by Nucleotide ID:NM_005290Re-query CCDS DB by Protein ID:NP_005281Link to BLAST:NP_005281.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_005281.1 360 P49685 360 100% 0 0

Chromosomal Locations for CCDS 2931.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 98532034 98533116 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1083 nt):
ATGGACCCAGAAGAAACTTCAGTTTATTTGGATTATTACTATGCTACGAGCCCAAACTCTGACATCAGGG
AGACCCACTCCCATGTTCCTTACACCTCTGTCTTCCTTCCAGTCTTTTACACAGCTGTGTTCCTGACTGG
AGTGCTGGGGAACCTTGTTCTCATGGGAGCGTTGCATTTCAAACCCGGCAGCCGAAGACTGATCGACATC
TTTATCATCAATCTGGCTGCCTCTGACTTCATTTTTCTTGTCACATTGCCTCTCTGGGTGGATAAAGAAG
CATCTCTAGGACTGTGGAGGACGGGCTCCTTCCTGTGCAAAGGGAGCTCCTACATGATCTCCGTCAATAT
GCACTGCAGTGTCCTCCTGCTCACTTGCATGAGTGTTGACCGCTACCTGGCCATTGTGTGGCCAGTCGTA
TCCAGGAAATTCAGAAGGACAGACTGTGCATATGTAGTCTGTGCCAGCATCTGGTTTATCTCCTGCCTGC
TGGGGTTGCCTACTCTTCTGTCCAGGGAGCTCACGCTGATTGATGATAAGCCATACTGTGCAGAGAAAAA
GGCAACTCCAATTAAACTCATATGGTCCCTGGTGGCCTTAATTTTCACCTTTTTTGTCCCTTTGTTGAGC
ATTGTGACCTGCTACTGTTGCATTGCAAGGAAGCTGTGTGCCCATTACCAGCAATCAGGAAAGCACAACA
AAAAGCTGAAGAAATCTATAAAGATCATCTTTATTGTCGTGGCAGCCTTTCTTGTCTCCTGGCTGCCCTT
CAATACTTTCAAGTTCCTGGCCATTGTCTCTGGGTTGCGGCAAGAACACTATTTACCCTCAGCTATTCTT
CAGCTTGGTATGGAGGTGAGTGGACCCTTGGCATTTGCCAACAGCTGTGTCAACCCTTTCATTTACTATA
TCTTCGACAGCTACATCCGCCGGGCCATTGTCCACTGCTTGTGCCCTTGCCTGAAAAACTATGACTTTGG
GAGTAGCACTGAGACATCAGATAGTCACCTCACTAAGGCTCTCTCCACCTTCATTCATGCAGAAGATTTT
GCCAGGAGGAGGAAGAGGTCTGTGTCACTCTAA

Translation (360 aa):
MDPEETSVYLDYYYATSPNSDIRETHSHVPYTSVFLPVFYTAVFLTGVLGNLVLMGALHFKPGSRRLIDI
FIINLAASDFIFLVTLPLWVDKEASLGLWRTGSFLCKGSSYMISVNMHCSVLLLTCMSVDRYLAIVWPVV
SRKFRRTDCAYVVCASIWFISCLLGLPTLLSRELTLIDDKPYCAEKKATPIKLIWSLVALIFTFFVPLLS
IVTCYCCIARKLCAHYQQSGKHNKKLKKSIKIIFIVVAAFLVSWLPFNTFKFLAIVSGLRQEHYLPSAIL
QLGMEVSGPLAFANSCVNPFIYYIFDSYIRRAIVHCLCPCLKNYDFGSSTETSDSHLTKALSTFIHAEDF
ARRRKRSVSL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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