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Report for CCDS49383.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
49383.1 Public Mus musculus 14 4930555G01Rik 23 108 98 CCDS HistoryNCBI Gene:108978Re-query CCDS DB by CCDS ID:49383.1Re-query CCDS DB by GeneID:108978See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 49383.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000112770.2 ENSMUSP00000108390.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000112770.2Link to Ensembl Protein Viewer:ENSMUSP00000108390.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000112770Re-query CCDS DB by Protein ID:ENSMUSP00000108390
Original member Current member NCBI NM_175393.4 NP_780602.2 Accepted alive Link to Nucleotide Sequence:NM_175393.4Link to Protein Sequence:NP_780602.2Re-query CCDS DB by Nucleotide ID:NM_175393Re-query CCDS DB by Protein ID:NP_780602Link to BLAST:NP_780602.2

Chromosomal Locations for CCDS 49383.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 14 (NC_000080.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 5050711 5050840 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 5051573 5051735 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 5052696 5052827 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 5053501 5053684 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 5057870 5057878 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (618 nt):
ATGTTTTCCAGGCTGCTCAGGCTATGTCTGAAAGGGAATGGCGATGAAGGAGAGACCAGACCAAAAAAGA
AGGAAGAGGGAATCCTTTCTCATGAAAAAGGAAGAAGGAAATTGTTCTGGAGAAGGCACAGGCCTGCTAG
AAATACTTCAACCCAAAATTCCAACATCACAAATCAGATATCAAATATAAATAAAGTAGAAGAACTGAAA
TTGCATATAAGGAAGATCAGCAATGAGAGGAAGGAAATGTGTGAAATCCTGAATGTTTACATGTATGAGG
ATTTAAACTACAGGATGAACACTGAATTCAACATAATTAAATCACAACATGAGAAGACAATGTTGGATAT
GAATAAAATGACCCAGTCCATAATTGGTTCCATGCAGTACTCCATGGAACTGATAGAAGATAACTATTCC
TACAGCATTAAGGAGGACCACCTCCTCCGTGAGTGCACTCAACTCAACAAAAAAGTAAGGATATTACTGA
ATGAGAACAGAAAGCTGCTGGTGGAGCAGGCTGGAACGCAAGTGTCCTGTGGGGAAGAAAAGAGGTTCTG
TGAGGAGGCCAGCAAGAACATCTGTGCCTCAAGTGCAAAGGAACAGCAGCTTCCCTAA

Translation (205 aa):
MFSRLLRLCLKGNGDEGETRPKKKEEGILSHEKGRRKLFWRRHRPARNTSTQNSNITNQISNINKVEELK
LHIRKISNERKEMCEILNVYMYEDLNYRMNTEFNIIKSQHEKTMLDMNKMTQSIIGSMQYSMELIEDNYS
YSIKEDHLLRECTQLNKKVRILLNENRKLLVEQAGTQVSCGEEKRFCEEASKNICASSAKEQQLP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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