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Report for CCDS5155.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
5155.1 Public Homo sapiens 6 TAAR6 24 110 108 CCDS HistoryNCBI Gene:319100Re-query CCDS DB by CCDS ID:5155.1Re-query CCDS DB by GeneID:319100See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 5155.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000275198.1 ENSP00000275198.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000275198.1Link to Ensembl Protein Viewer:ENSP00000275198.1Re-query CCDS DB by Nucleotide ID:ENST00000275198Re-query CCDS DB by Protein ID:ENSP00000275198
Original member Current member NCBI NM_175067.1 NP_778237.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_175067.1Link to Protein Sequence:NP_778237.1Re-query CCDS DB by Nucleotide ID:NM_175067Re-query CCDS DB by Protein ID:NP_778237Link to BLAST:NP_778237.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_778237.1 345 Q96RI8 345 100% 0 0

Chromosomal Locations for CCDS 5155.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 132570322 132571359 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1038 nt):
ATGAGCAGCAATTCATCCCTGCTGGTGGCTGTGCAGCTGTGCTACGCGAACGTGAATGGGTCCTGTGTGA
AAATCCCCTTCTCGCCGGGATCCCGGGTGATTCTGTACATAGTGTTTGGCTTTGGGGCTGTGCTGGCTGT
GTTTGGAAACCTCCTGGTGATGATTTCAATCCTCCATTTCAAGCAGCTGCACTCTCCGACCAATTTTCTC
GTTGCCTCTCTGGCCTGCGCTGATTTCTTGGTGGGTGTGACTGTGATGCCCTTCAGCATGGTCAGGACGG
TGGAGAGCTGCTGGTATTTTGGGAGGAGTTTTTGTACTTTCCACACCTGCTGTGATGTGGCATTTTGTTA
CTCTTCTCTCTTTCACTTGTGCTTCATCTCCATCGACAGGTACATTGCGGTTACTGACCCCCTGGTCTAT
CCTACCAAGTTCACCGTATCTGTGTCAGGAATTTGCATCAGCGTGTCCTGGATCCTGCCCCTCATGTACA
GCGGTGCTGTGTTCTACACAGGTGTCTATGACGATGGGCTGGAGGAATTATCTGATGCCCTAAACTGTAT
AGGAGGTTGTCAGACCGTTGTAAATCAAAACTGGGTGTTGACAGATTTTCTATCCTTCTTTATACCTACC
TTTATTATGATAATTCTGTATGGTAACATATTTCTTGTGGCTAGACGACAGGCGAAAAAGATAGAAAATA
CTGGTAGCAAGACAGAATCATCCTCAGAGAGTTACAAAGCCAGAGTGGCCAGGAGAGAGAGAAAAGCAGC
TAAAACCCTGGGGGTCACAGTGGTAGCATTTATGATTTCATGGTTACCATATAGCATTGATTCATTAATT
GATGCCTTTATGGGCTTTATAACCCCTGCCTGTATTTATGAGATTTGCTGTTGGTGTGCTTATTATAACT
CAGCCATGAATCCTTTGATTTATGCTTTATTTTACCCATGGTTTAGGAAAGCAATAAAAGTTATTGTAAC
TGGTCAGGTTTTAAAGAACAGTTCAGCAACCATGAATTTGTTTTCTGAACATATATAA

Translation (345 aa):
MSSNSSLLVAVQLCYANVNGSCVKIPFSPGSRVILYIVFGFGAVLAVFGNLLVMISILHFKQLHSPTNFL
VASLACADFLVGVTVMPFSMVRTVESCWYFGRSFCTFHTCCDVAFCYSSLFHLCFISIDRYIAVTDPLVY
PTKFTVSVSGICISVSWILPLMYSGAVFYTGVYDDGLEELSDALNCIGGCQTVVNQNWVLTDFLSFFIPT
FIMIILYGNIFLVARRQAKKIENTGSKTESSSESYKARVARRERKAAKTLGVTVVAFMISWLPYSIDSLI
DAFMGFITPACIYEICCWCAYYNSAMNPLIYALFYPWFRKAIKVIVTGQVLKNSSATMNLFSEHI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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