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Report for CCDS26644.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
26644.1 Public Mus musculus 13 Ccdc127 23 108 98 CCDS HistoryNCBI Gene:67433Re-query CCDS DB by CCDS ID:26644.1Re-query CCDS DB by GeneID:67433See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 26644.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000022063.13 ENSMUSP00000022063.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000022063.13Link to Ensembl Protein Viewer:ENSMUSP00000022063.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000022063Re-query CCDS DB by Protein ID:ENSMUSP00000022063
Original member Current member NCBI NM_001168659.1 NP_001162130.1 Accepted alive Link to Nucleotide Sequence:NM_001168659.1Link to Protein Sequence:NP_001162130.1Re-query CCDS DB by Nucleotide ID:NM_001168659Re-query CCDS DB by Protein ID:NP_001162130Link to BLAST:NP_001162130.1
Original member Current member NCBI NM_024201.3 NP_077163.1 Accepted alive Link to Nucleotide Sequence:NM_024201.3Link to Protein Sequence:NP_077163.1Re-query CCDS DB by Nucleotide ID:NM_024201Re-query CCDS DB by Protein ID:NP_077163Link to BLAST:NP_077163.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001162130.1 260 Q3TC33-1 260 100% 0 0
NP_077163.1 260 Q3TC33-1 260 100% 0 0

Chromosomal Locations for CCDS 26644.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 13 (NC_000079.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 74352866 74352986 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 74356456 74357117 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (783 nt):
ATGAATAACTTAAACGACCCCCCAAATTGGAATATCAGGCCCAATGCCAGGGCTGATGGGGGTGATGGAA
GCAAGTGGAATTATGCCCTATTGGTGCCAATGCTCGGATTGGCAGCATTTCGTTGGATTTGGTCTAGGGA
ATCCCAAAAAGAGATAGAAAAAGCCAGAAAAGCATATCATCAGAGAACAGCTGCTTTCCAACAGGATCTT
GAAGCCAAATACCATGCTGTGATCTCAGAACACCGGCGCGCTGTGGCTCAGCTGTCTTTGGAACTGGAAA
AAGAGCAAAATAGAACAAGTAGTTTTCGAGAAGCCCTCATCTCGCAGGGGCGTAAGTTGGCAGAAGAAAA
GAAACTTCTCGAACAGGAACGGGCTCAGATAAAGCAAGAAAAAAGCCGGCTCCAGCCTCTGAGAAATGTC
TATTTGAGCTGCCTGCAAGAAGAGGATGACTGGCAGAGGAGAGCCCAGCATGTGCTGAAAGAGGTGGGAG
AAGCTCTCGAGGAACGCCAAAATATCTATTGTAGCCTGATCATCCCCCGTAGTGCACGACTAGAGCTGGA
GAAGAGCTTACTGGTGCGCACATCTGTTGATCCAGTGGCTGCTGACCTAGAAATGGCAGCTGGCTTGTCT
GACATATTTAAGCATGATAAGCATTGTGGAGATGTCTGGAACACCAACAAACGTCAAAATGGGAAGCTCA
TGTGGATGTATCTCAAATACTGGGAACTACTTGTCGAACTTAAAAAATTTAAGAAAGTAGAGAAGGTCAT
ATTAGAAAAATAA

Translation (260 aa):
MNNLNDPPNWNIRPNARADGGDGSKWNYALLVPMLGLAAFRWIWSRESQKEIEKARKAYHQRTAAFQQDL
EAKYHAVISEHRRAVAQLSLELEKEQNRTSSFREALISQGRKLAEEKKLLEQERAQIKQEKSRLQPLRNV
YLSCLQEEDDWQRRAQHVLKEVGEALEERQNIYCSLIIPRSARLELEKSLLVRTSVDPVAADLEMAAGLS
DIFKHDKHCGDVWNTNKRQNGKLMWMYLKYWELLVELKKFKKVEKVILEK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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