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Report for CCDS14314.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14314.1 Public Homo sapiens X KCND1 24 110 108 CCDS HistoryNCBI Gene:3750Re-query CCDS DB by CCDS ID:14314.1Re-query CCDS DB by GeneID:3750See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14314.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000218176.4 ENSP00000218176.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000218176.4Link to Ensembl Protein Viewer:ENSP00000218176.3Re-query CCDS DB by Nucleotide ID:ENST00000218176Re-query CCDS DB by Protein ID:ENSP00000218176
Original member Current member NCBI NM_004979.6 NP_004970.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_004979.6Link to Protein Sequence:NP_004970.3Re-query CCDS DB by Nucleotide ID:NM_004979Re-query CCDS DB by Protein ID:NP_004970Link to BLAST:NP_004970.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_004970.3 647 Q9NSA2-1 647 100% 0 0

Chromosomal Locations for CCDS 14314.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 48962581 48962806 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 48966055 48966305 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 48966578 48966676 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 48966761 48966844 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 48966944 48967106 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 48969151 48970271 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1944 nt):
ATGGCGGCAGGCCTGGCCACGTGGCTGCCTTTTGCTCGGGCAGCAGCAGTGGGCTGGCTGCCCCTGGCCC
AGCAACCCCTGCCCCCGGCACCGGGGGTGAAGGCATCTCGAGGAGATGAGGTTCTGGTGGTGAACGTGAG
CGGACGGCGCTTTGAGACTTGGAAGAATACGCTGGACCGCTACCCAGACACCTTGCTGGGCAGCTCGGAG
AAGGAATTCTTCTACGATGCTGACTCAGGCGAGTACTTCTTCGATCGCGACCCTGACATGTTCCGCCATG
TGCTGAACTTCTACCGAACGGGGCGGCTGCATTGCCCACGGCAGGAGTGCATCCAGGCCTTCGACGAAGA
GCTGGCTTTCTACGGCCTGGTTCCCGAGCTAGTCGGTGACTGCTGCCTTGAAGAGTATCGGGACCGAAAG
AAGGAGAATGCCGAGCGCCTGGCAGAGGATGAGGAGGCAGAGCAGGCCGGGGACGGCCCAGCCCTGCCAG
CAGGCAGCTCCCTGCGGCAGCGGCTCTGGCGGGCCTTCGAGAATCCACACACGAGCACCGCAGCCCTCGT
TTTCTACTATGTGACCGGCTTCTTCATCGCCGTGTCGGTCATCGCCAATGTGGTGGAGACCATCCCATGC
CGCGGCTCTGCACGCAGGTCCTCAAGGGAGCAGCCCTGTGGCGAACGCTTCCCACAGGCCTTTTTCTGCA
TGGACACAGCCTGTGTACTCATATTCACAGGTGAATACCTCCTGCGGCTGTTTGCCGCCCCCAGCCGTTG
CCGCTTCCTGCGGAGTGTCATGAGCCTCATCGACGTGGTGGCCATCCTGCCCTACTACATTGGGCTTTTG
GTGCCCAAGAACGACGATGTCTCTGGCGCCTTTGTCACCCTGCGTGTGTTCCGGGTGTTTCGCATCTTCA
AGTTCTCCAGGCACTCACAGGGCTTGAGGATTCTGGGCTACACACTCAAGAGCTGTGCCTCTGAGCTGGG
CTTTCTCCTCTTTTCCCTAACCATGGCCATCATCATCTTTGCCACTGTCATGTTTTATGCTGAGAAGGGC
ACAAACAAGACCAACTTTACAAGCATCCCTGCGGCCTTCTGGTATACCATTGTCACCATGACCACGCTTG
GCTACGGAGACATGGTGCCCAGCACCATTGCTGGCAAGATTTTCGGGTCCATCTGCTCACTCAGTGGCGT
CTTGGTCATTGCCCTGCCTGTGCCAGTCATTGTGTCCAACTTTAGCCGCATCTACCACCAGAACCAGCGG
GCTGACAAGCGCCGAGCACAGCAGAAGGTGCGCTTGGCAAGGATCCGATTGGCAAAGAGTGGTACCACCA
ATGCCTTCCTGCAGTACAAGCAGAATGGGGGCCTTGAGGACAGCGGCAGTGGCGAGGAACAGGCTCTTTG
TGTCAGGAACCGTTCTGCCTTTGAACAGCAACATCACCACTTGCTGCACTGTCTAGAGAAGACAACGTGC
CATGAGTTCACAGATGAGCTCACCTTCAGTGAAGCCCTGGGAGCCGTCTCGCCGGGTGGCCGCACCAGCC
GTAGCACCTCTGTGTCTTCCCAGCCAGTGGGACCCGGAAGCCTGCTGTCTTCTTGCTGCCCTCGCAGGGC
CAAGCGCCGCGCCATCCGCCTTGCCAACTCCACTGCCTCAGTCAGCCGTGGCAGCATGCAGGAGCTGGAC
ATGCTGGCAGGGCTGCGCAGGAGCCATGCCCCTCAGAGCCGTTCCAGCCTCAATGCCAAGCCCCATGACA
GCCTTGACCTGAACTGCGACAGCCGGGACTTCGTGGCTGCCATTATCAGCATCCCTACCCCTCCTGCCAA
CACCCCAGATGAGAGCCAACCTTCCTCCCCTGGCGGCGGTGGCAGGGCCGGCAGCACCCTCAGGAACTCC
AGCCTGGGTACCCCTTGCCTCTTCCCCGAGACTGTCAAGATCTCATCCCTGTGA

Translation (647 aa):
MAAGLATWLPFARAAAVGWLPLAQQPLPPAPGVKASRGDEVLVVNVSGRRFETWKNTLDRYPDTLLGSSE
KEFFYDADSGEYFFDRDPDMFRHVLNFYRTGRLHCPRQECIQAFDEELAFYGLVPELVGDCCLEEYRDRK
KENAERLAEDEEAEQAGDGPALPAGSSLRQRLWRAFENPHTSTAALVFYYVTGFFIAVSVIANVVETIPC
RGSARRSSREQPCGERFPQAFFCMDTACVLIFTGEYLLRLFAAPSRCRFLRSVMSLIDVVAILPYYIGLL
VPKNDDVSGAFVTLRVFRVFRIFKFSRHSQGLRILGYTLKSCASELGFLLFSLTMAIIIFATVMFYAEKG
TNKTNFTSIPAAFWYTIVTMTTLGYGDMVPSTIAGKIFGSICSLSGVLVIALPVPVIVSNFSRIYHQNQR
ADKRRAQQKVRLARIRLAKSGTTNAFLQYKQNGGLEDSGSGEEQALCVRNRSAFEQQHHHLLHCLEKTTC
HEFTDELTFSEALGAVSPGGRTSRSTSVSSQPVGPGSLLSSCCPRRAKRRAIRLANSTASVSRGSMQELD
MLAGLRRSHAPQSRSSLNAKPHDSLDLNCDSRDFVAAIISIPTPPANTPDESQPSSPGGGGRAGSTLRNS
SLGTPCLFPETVKISSL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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