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Report for CCDS29732.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
29732.1 Public Mus musculus 19 Insl6 23 108 98 CCDS HistoryNCBI Gene:27356Re-query CCDS DB by CCDS ID:29732.1See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 29732.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000052380.4 ENSMUSP00000054488.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000052380.4Link to Ensembl Protein Viewer:ENSMUSP00000054488.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000052380Re-query CCDS DB by Protein ID:ENSMUSP00000054488
Original member Current member NCBI NM_013754.1 NP_038782.1 Accepted alive Link to Nucleotide Sequence:NM_013754.1Link to Protein Sequence:NP_038782.1Re-query CCDS DB by Nucleotide ID:NM_013754Re-query CCDS DB by Protein ID:NP_038782Link to BLAST:NP_038782.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_038782.1 191 Q9QY05 191 100% 0 0

Chromosomal Locations for CCDS 29732.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 19 (NC_000085.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 29321435 29321739 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 29325045 29325315 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (576 nt):
ATGAAGCAGCTGTGCTGTTCTTGTCTGTTGTGGCTTGGACTCCTACTGACTCCTTTCTCCAGGGAAGAGG
AAGAGGAATCCAGACCCAGGAAGCTGTGCGGCAGGCACCTGCTGATAGAAGTTATAAAACTCTGTGGCCA
AAGTGACTGGAGCCGGTTCGAGATGGAGGAGCAAAGTCCTATGACACAGTTCTTTCCCCACTACTCACGC
AAGGGCAAAGCCTTCAACCCTCACCCTTCTTCCTCCGCCTGGAGAAGATTCACAAACCCAGTCCCTGCAG
GCGTCTCTCAGAAGAAAGGAACACACACTTGGGAGCCTCAGTCACTGCCCGACTATCAGTTTGAAAAGAC
GGAGTTGCTTCCTAAGGCAAGAGTGTTTTCATACCACAGTGGCAAGCCCTATGTTAAGAGCGTACAACTT
CAGAAGAAAAGCACGAACAAAATGAATACCTTCAGAAGTTTATTTTGGGGGAATCATTCCCAAAGGAAAC
GCAGAGGCTTTGCAGATAAGTGCTGTGTGATAGGATGCACCAAAGAAGAGATGGCCGTCGCGTGCCTCCC
CTTTGTTGATTTTTAA

Translation (191 aa):
MKQLCCSCLLWLGLLLTPFSREEEEESRPRKLCGRHLLIEVIKLCGQSDWSRFEMEEQSPMTQFFPHYSR
KGKAFNPHPSSSAWRRFTNPVPAGVSQKKGTHTWEPQSLPDYQFEKTELLPKARVFSYHSGKPYVKSVQL
QKKSTNKMNTFRSLFWGNHSQRKRRGFADKCCVIGCTKEEMAVACLPFVDF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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