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Report for CCDS54132.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
54132.1 Public Homo sapiens 17 CD300LG 24 110 108 CCDS HistoryNCBI Gene:146894Re-query CCDS DB by CCDS ID:54132.1Re-query CCDS DB by GeneID:146894See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 54132.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000377203.8 ENSP00000366408.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000377203.8Link to Ensembl Protein Viewer:ENSP00000366408.3Re-query CCDS DB by Nucleotide ID:ENST00000377203Re-query CCDS DB by Protein ID:ENSP00000366408
Original member Current member NCBI NM_001168323.2 NP_001161795.1 Accepted alive Link to Nucleotide Sequence:NM_001168323.2Link to Protein Sequence:NP_001161795.1Re-query CCDS DB by Nucleotide ID:NM_001168323Re-query CCDS DB by Protein ID:NP_001161795Link to BLAST:NP_001161795.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001161795.1 273 Q6UXG3-5 273 100% 0 0

Chromosomal Locations for CCDS 54132.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 43847217 43847259 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 43848558 43848893 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 43853807 43854044 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 43855207 43855319 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 43857104 43857156 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 43857790 43857828 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (822 nt):
ATGCGGCTTCTGGTCCTGCTATGGGGTTGCCTGCTGCTCCCAGGTTATGAAGCCCTGGAGGGCCCAGAGG
AAATCAGCGGGTTCGAAGGGGACACTGTGTCCCTGCAGTGCACCTACAGGGAAGAGCTGAGGGACCACCG
GAAGTACTGGTGCAGGAAGGGTGGGATCCTCTTCTCTCGCTGCTCTGGCACCATCTATGCAGAAGAAGAA
GGCCAGGAGACAATGAAGGGCAGGGTGTCCATCCGTGACAGCCGCCAGGAGCTCTCGCTCATTGTGACCC
TGTGGAACCTCACCCTGCAAGACGCTGGGGAGTACTGGTGTGGGGTCGAAAAACGGGGCCCCGATGAGTC
TTTACTGATCTCTCTGTTCGTCTTTCCAGCTTCTCCTGGGCTCTACCCGGCAGCCACCACAGCCAAGCAG
GGGAAGACAGGGGCTGAGGCCCCTCCATTGCCAGGGACTTCCCAGTACGGGCACGAAAGGACTTCTCAGT
ACACAGGAACCTCTCCTCACCCAGCGACCTCTCCTCCTGCAGGGAGCTCCCGCCCCCCCATGCAGCTGGA
CTCCACCTCAGCAGAGGACACCAGTCCAGCTCTCAGCAGTGGCAGCTCTAAGCCCAGGGTGTCCATCCCG
ATGGTCCGCATACTGGCCCCAGTCCTGGTGCTGCTGAGCCTTCTGTCAGCCGCAGGCCTGATCGCCTTCT
GCAGCCACCTGCTCCTGTGGAGAAAGGAAGCTCAACAGGCCACGGAGACACAGAGGAACGAGAAGTTCTG
CCTCTCACGCTTGAACTCCCTGATGTTTTCTCTGAGCCTGCCTTGGCTCTGA

Translation (273 aa):
MRLLVLLWGCLLLPGYEALEGPEEISGFEGDTVSLQCTYREELRDHRKYWCRKGGILFSRCSGTIYAEEE
GQETMKGRVSIRDSRQELSLIVTLWNLTLQDAGEYWCGVEKRGPDESLLISLFVFPASPGLYPAATTAKQ
GKTGAEAPPLPGTSQYGHERTSQYTGTSPHPATSPPAGSSRPPMQLDSTSAEDTSPALSSGSSKPRVSIP
MVRILAPVLVLLSLLSAAGLIAFCSHLLLWRKEAQQATETQRNEKFCLSRLNSLMFSLSLPWL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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