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Report for CCDS23761.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
23761.1 Public Mus musculus 10 Rspo3 23 108 98 CCDS HistoryNCBI Gene:72780Re-query CCDS DB by CCDS ID:23761.1Re-query CCDS DB by GeneID:72780See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 23761.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000092623.4 ENSMUSP00000090287.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000092623.4Link to Ensembl Protein Viewer:ENSMUSP00000090287.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000092623Re-query CCDS DB by Protein ID:ENSMUSP00000090287
Original member Current member NCBI NM_028351.3 NP_082627.3 Accepted alive Link to Nucleotide Sequence:NM_028351.3Link to Protein Sequence:NP_082627.3Re-query CCDS DB by Nucleotide ID:NM_028351Re-query CCDS DB by Protein ID:NP_082627Link to BLAST:NP_082627.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_082627.3 277 Q2TJ95 277 100% 0 0

Chromosomal Locations for CCDS 23761.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 10 (NC_000076.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 29454130 29454329 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 29499932 29500129 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 29504581 29504727 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 29506388 29506579 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 29535232 29535328 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (834 nt):
ATGCACTTGCGACTGATTTCTTGTTTTTTTATCATTTTGAACTTTATGGAATACATTGGCAGCCAAAACG
CCTCCCGAGGAAGGCGCCAGCGAAGAATGCATCCTAATGTCAGTCAAGGCTGCCAAGGAGGCTGTGCAAC
GTGTTCAGATTACAATGGCTGTTTGTCATGTAAGCCCAGACTGTTTTTTGTTCTGGAAAGGATTGGCATG
AAGCAGATAGGAGTGTGTCTCTCTTCGTGTCCAAGTGGATATTACGGAACTCGATATCCAGATATAAATA
AATGTACAAAATGCAAAGTTGACTGTGATACCTGTTTCAACAAAAATTTCTGCACAAAGTGTAAAAGTGG
ATTTTACTTACACCTTGGAAAGTGCCTTGACAGTTGCCCAGAAGGGTTAGAAGCCAACAATCATACTATG
GAATGTGTCAGTATTGTACACTGTGAGGCCAGTGAATGGAGTCCATGGAGTCCATGTATGAAGAAAGGAA
AAACATGTGGCTTCAAAAGGGGGACTGAAACACGGGTCCGAGATATACTACAGCATCCTTCAGCCAAGGG
TAACCTGTGCCCCCCAACCAGCGAGACAAGAACTTGTATAGTACAAAGAAAGAAGTGTTCAAAGGGAGAG
CGAGGAAAAAAGGGAAGAGAGAGAAAACGAAAAAAACTGAATAAAGAAGAAAGAAAGGAAACAAGCTCCT
CCTCTGACAGCAAAGGTTTGGAGTCCAGCATTGAGACCCCAGACCAGCAGGAAAACAAAGAGAGGCAGCA
GCAGCAGAAGAGAAGAGCCCGAGACAAGCAACAGAAATCGGTATCAGTCAGCACTGTACACTAG

Translation (277 aa):
MHLRLISCFFIILNFMEYIGSQNASRGRRQRRMHPNVSQGCQGGCATCSDYNGCLSCKPRLFFVLERIGM
KQIGVCLSSCPSGYYGTRYPDINKCTKCKVDCDTCFNKNFCTKCKSGFYLHLGKCLDSCPEGLEANNHTM
ECVSIVHCEASEWSPWSPCMKKGKTCGFKRGTETRVRDILQHPSAKGNLCPPTSETRTCIVQRKKCSKGE
RGKKGRERKRKKLNKEERKETSSSSDSKGLESSIETPDQQENKERQQQQKRRARDKQQKSVSVSTVH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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