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Report for CCDS58400.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
58400.1 Public Homo sapiens 15 PGPEP1L 24 110 108 CCDS HistoryNCBI Gene:145814Re-query CCDS DB by CCDS ID:58400.1Re-query CCDS DB by GeneID:145814See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 11, NCBI annotation release 103, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 58400.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000535714.2 ENSP00000437560.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000535714.2Link to Ensembl Protein Viewer:ENSP00000437560.1Re-query CCDS DB by Nucleotide ID:ENST00000535714Re-query CCDS DB by Protein ID:ENSP00000437560
Original member Current member NCBI NM_001167902.2 NP_001161374.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001167902.2Link to Protein Sequence:NP_001161374.1Re-query CCDS DB by Nucleotide ID:NM_001167902Re-query CCDS DB by Protein ID:NP_001161374Link to BLAST:NP_001161374.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001161374.1 142 A6NFU8-2 142 100% 0 0

Chromosomal Locations for CCDS 58400.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 98968478 98968697 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 98969425 98969633 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (429 nt):
ATGGACACCGCCGCCAAGGCGATCATTCTGGAACAGTCTGGCAAGAACCAAGGCTACCGGGACGCCGACA
TCCGCAGCTTCTGGCCCGAGGGCGGCGTGTGCCTACCTGGCAGCCCAGACGTGCTGGAGTCAGGGGTCTG
CATGAAGGCAGTCTGCAAGCGCGTAGCTGTGGAGGGTGTCGACGTGATCTTTTCCCGAGATGCAGGCAGA
TACGTCTGTGATTATACCTATTACCTGTCTCTGCATCATGGAAAGGGCTGCGCGGCACTCATCCATGTCC
CTCCACTATCGCGCGGGCTCCCGGCCAGCCTGCTGGGAAGAGCCTTGAGAGTCATCATCCAGGAAATGCT
GGAAGAGGTGGGAAAGCCCAAGCACAGAGCCCAGTTCGAAGAAAACTCAACCATGGTCCTTCCAGCCAAA
GGGAACTGA

Translation (142 aa):
MDTAAKAIILEQSGKNQGYRDADIRSFWPEGGVCLPGSPDVLESGVCMKAVCKRVAVEGVDVIFSRDAGR
YVCDYTYYLSLHHGKGCAALIHVPPLSRGLPASLLGRALRVIIQEMLEEVGKPKHRAQFEENSTMVLPAK
GN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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