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Report for CCDS36920.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
36920.1 Public Mus musculus 14 Tox4 23 108 98 CCDS HistoryNCBI Gene:268741Re-query CCDS DB by CCDS ID:36920.1See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 36920.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000022766.7 ENSMUSP00000022766.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000022766.7Link to Ensembl Protein Viewer:ENSMUSP00000022766.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000022766Re-query CCDS DB by Protein ID:ENSMUSP00000022766
Original member Current member NCBI NM_023434.3 NP_075923.2 Accepted alive Link to Nucleotide Sequence:NM_023434.3Link to Protein Sequence:NP_075923.2Re-query CCDS DB by Nucleotide ID:NM_023434Re-query CCDS DB by Protein ID:NP_075923Link to BLAST:NP_075923.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_075923.2 619 Q8BU11 619 100% 0 0

Chromosomal Locations for CCDS 36920.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 14 (NC_000080.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 52279651 52279656 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 52279821 52279889 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 52285660 52285902 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 52286729 52286989 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 52287301 52287531 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 52290761 52290841 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 52291475 52292218 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 52292520 52292683 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 52293201 52293261 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1860 nt):
ATGGAGTTTCCCGGAGGAAATGACAATTACCTGACGATCACTGGGCCCTCGCACCCTTTCCTGTCAGGAG
CCGAGACATTCCATACACCAAGCTTGGGCGATGAGGAATTTGAAATTCCACCTATCTCCTTGGACTCTGA
TCCCTCACTGGCTGTCTCAGATGTGGTTGGCCACTTTGATGACCTGGCAGACCCCTCCTCTTCACAGGAT
GGCAGCTTTTCAGCTCAATACGGGGTCCAGACATTGGACATGCCTGTGGGCATGACCCATGGCTTGATGG
AGCAGGGCGGGGGGCTCCTGAGTGGGGGCTTGACTATGGACCTGGACCATTCTATAGGAACTCAGTATAG
TGCCAACCCACCTGTTACAATTGATGTACCAATGACAGACATGACATCTGGCTTAATGGGACACAGCCAG
TTGACCACTATTGATCAGTCAGAACTGAGTTCTCAACTTGGTTTGAGTTTAGGAGGTGGCACCATCTTGC
CACCTGCCCAGTCACCTGAGGATCGTCTTTCAACTACTCCTTCACCTACCAATTCACTTCATGAGGATGG
TGTTGATGATTTCCGGAGGCAACTTCCCGCCCAGAAGACAGTGGTAGTGGAAACAGGGAAAAAGCAAAAG
GCTCCCAAGAAGAGAAAAAAGAAAGACCCAAATGAACCTCAGAAGCCAGTCTCTGCGTATGCATTGTTCT
TTCGAGATACGCAGGCTGCCATCAAGGGACAAAACCCAAACGCAACCTTTGGGGAGGTATCGAAGATTGT
GGCTTCCATGTGGGACAGTCTTGGAGAGGAACAGAAGCAGGTGTACAAGCGGAAGACTGAGGCTGCCAAG
AAAGAGTATCTCAAGGCACTAGCTGCTTATAAAGACAACCAGGAATGCCAGGCTACTGTGGAAACAGTGG
AATTAGATCCTGTGCCACAGTCACAGACTCCTTCCCCACCTCCTGTGACTGCTGCTGACCCAGCATCTCC
AGCACCAGCCTCAACGGAGTCTCCTGCTTTGCCCCCTTGCATCATAGTGAATTCCACGCTTTCATCTTAC
GTGGCAAACCAAGCCTCTTCTGGGCCTGGAGGTCAGCCCAATATTACCAAGTTGATTATTACCAAACAGA
TGTTGCCTTCTTCTATCACCATGTCCCAAGGTGGAATGGTTACTGTTATCCCAGCCACAGTGGTTACCTC
CCGTGGGCTCCAGGTAGGCCAAACAAGTACAGCTACTATTCAGCCAAGCCAGCAGGCCCAGATTGTCACC
CGGTCAGTGTTGCAGGCAGCTGCAGCTGCTGCTGCTTCCATGCAACTGCCTCCACCCCGACTACAGCCTC
CTCCGTTGCAACAGATGCCTCAGCCCCCAACTCAACAGCAAGTAACCATTCTACAGCAACCCCCTCCACT
TCAGGCCATGCAGCAACCTCCACCTCAGAAAGTTAGAATCAACTTACAGCAGCAGCCACCACCTCTGCAG
AGCAAGATTGTGCCTCCACCCACTCTGAAAATACAGACTACTGTGGTCCCTCCAACTGTAGAAAGCAGTC
CTGAGCAGCCTATGAACAGCAGCCCCGAGGCCCACACAGTAGAGGCAACCTCTCCTGAGACAATCTGTGA
AATGATCGCAGATGTAGTTCCTGAGGTGGAGTCTCCTTCTCAGATGGATGTTGAATTGGTGAGTGGCTCC
CCTGTGGCACTGTCACCTCAGCCTCGATGTGTGAGGTCTGGTTGTGAGAACCCTCCTGTTGTCAGTAAGG
ACTGGGACAACGAGTACTGCAGCAATGAGTGTGTGGTGAAGCACTGCAGGGATGTATTCTTGGCCTGGGT
GGCCTCTAGAAATCCAAACTCTGTGGTGTTTGTGAAGTAG

Translation (619 aa):
MEFPGGNDNYLTITGPSHPFLSGAETFHTPSLGDEEFEIPPISLDSDPSLAVSDVVGHFDDLADPSSSQD
GSFSAQYGVQTLDMPVGMTHGLMEQGGGLLSGGLTMDLDHSIGTQYSANPPVTIDVPMTDMTSGLMGHSQ
LTTIDQSELSSQLGLSLGGGTILPPAQSPEDRLSTTPSPTNSLHEDGVDDFRRQLPAQKTVVVETGKKQK
APKKRKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAAK
KEYLKALAAYKDNQECQATVETVELDPVPQSQTPSPPPVTAADPASPAPASTESPALPPCIIVNSTLSSY
VANQASSGPGGQPNITKLIITKQMLPSSITMSQGGMVTVIPATVVTSRGLQVGQTSTATIQPSQQAQIVT
RSVLQAAAAAAASMQLPPPRLQPPPLQQMPQPPTQQQVTILQQPPPLQAMQQPPPQKVRINLQQQPPPLQ
SKIVPPPTLKIQTTVVPPTVESSPEQPMNSSPEAHTVEATSPETICEMIADVVPEVESPSQMDVELVSGS
PVALSPQPRCVRSGCENPPVVSKDWDNEYCSNECVVKHCRDVFLAWVASRNPNSVVFVK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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