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Report for CCDS36768.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
36768.1 Public Mus musculus 13 Ccnb1 23 108 98 CCDS HistoryNCBI Gene:268697Re-query CCDS DB by CCDS ID:36768.1See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 36768.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000072119.14 ENSMUSP00000071989.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000072119.14Link to Ensembl Protein Viewer:ENSMUSP00000071989.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000072119Re-query CCDS DB by Protein ID:ENSMUSP00000071989
Original member Current member NCBI NM_172301.3 NP_758505.2 Accepted alive Link to Nucleotide Sequence:NM_172301.3Link to Protein Sequence:NP_758505.2Re-query CCDS DB by Nucleotide ID:NM_172301Re-query CCDS DB by Protein ID:NP_758505Link to BLAST:NP_758505.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_758505.2 430 P24860 430 100% 0 0

Chromosomal Locations for CCDS 36768.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 13 (NC_000079.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 100779678 100779785 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 100780022 100780132 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 100780776 100780916 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 100781158 100781394 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 100781625 100781783 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 100783465 100783647 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 100785457 100785618 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 100785733 100785903 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 100786382 100786402 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1293 nt):
ATGGCGCTCAGGGTCACTAGGAACACGAAAATTAACGCAGAAAATAAGGCCAAGGTCAGTATGGCAGGCG
CCAAGCGTGTGCCTGTGACAGTTACTGCTGCTTCCAAGCCCGGGCTGAGACCGAGAACTGCTCTTGGAGA
CATTGGTAATAAAGTCAGCGAAGAGCTACAGGCAAGAGTGCCTCTGAAAAGGGAAGCAAAAACGCTAGGT
ACTGGAAAAGGTACTGTTAAAGCCCTACCAAAACCTGTAGAGAAGGTGCCTGTGTGTGAACCAGAGGTGG
AACTTGCTGAGCCTGAGCCTGAACCTGAACTTGAACATGTTAGAGAAGAGAAGCTTTCTCCTGAACCTAT
TTTGGTTGATAATCCCTCTCCAAGCCCGATGGAAACATCTGGATGTGCGCCTGCAGAAGAGTATCTGTGT
CAGGCTTTCTCTGATGTAATCCTTGCAGTGAGTGACGTAGACGCAGATGATGGGGCTGACCCAAACCTCT
GTAGTGAATATGTGAAAGATATCTATGCTTATCTCCGACAACTGGAGGAAGAGCAGTCAGTTAGACCAAA
ATACCTACAGGGTCGTGAAGTGACTGGAAACATGAGAGCTATCCTCATTGACTGGCTAATACAGGTTCAG
ATGAAATTTAGGCTGCTTCAGGAGACCATGTACATGACTGTGTCCATTATTGATCGGTTCATGCAGAACA
GTTGTGTGCCCAAGAAGATGCTACAGCTGGTCGGTGTAACGGCCATGTTTATTGCAAGCAAATATGAGGA
GATGTACCCTCCAGAAATAGGTGACTTCGCCTTTGTGACTAACAACACGTACACTAAGCACCAGATCAGA
CAGATGGAGATGAAGATTCTCAGAGTTCTGAACTTCAGCCTGGGTCGCCCTCTGCCTCTGCACTTCCTCC
GTAGAGCATCTAAAGTCGGAGAGGTTGACGTCGAGCAGCACACTTTGGCCAAATACCTCATGGAGCTCTC
CATGCTGGACTACGACATGGTGCATTTTGCTCCTTCTCAAATTGCAGCTGGGGCTTTCTGCTTAGCGCTG
AAAATTCTTGACAACGGTGAATGGACACCAACTCTGCAGCACTACCTATCCTACAGTGAAGACTCCCTGC
TTCCTGTTATGCAGCACCTGGCTAAGAATGTAGTCATGGTGAACTGTGGCCTCACAAAGCACATGACTGT
CAAGAACAAGTATGCAGCATCTAAGCATGCTAAGATCAGCACGCTGGCACAGCTGAACTGTACACTAGTT
CAGAATTTGTCTAAGGCCGTGACAAAGGCATAA

Translation (430 aa):
MALRVTRNTKINAENKAKVSMAGAKRVPVTVTAASKPGLRPRTALGDIGNKVSEELQARVPLKREAKTLG
TGKGTVKALPKPVEKVPVCEPEVELAEPEPEPELEHVREEKLSPEPILVDNPSPSPMETSGCAPAEEYLC
QAFSDVILAVSDVDADDGADPNLCSEYVKDIYAYLRQLEEEQSVRPKYLQGREVTGNMRAILIDWLIQVQ
MKFRLLQETMYMTVSIIDRFMQNSCVPKKMLQLVGVTAMFIASKYEEMYPPEIGDFAFVTNNTYTKHQIR
QMEMKILRVLNFSLGRPLPLHFLRRASKVGEVDVEQHTLAKYLMELSMLDYDMVHFAPSQIAAGAFCLAL
KILDNGEWTPTLQHYLSYSEDSLLPVMQHLAKNVVMVNCGLTKHMTVKNKYAASKHAKISTLAQLNCTLV
QNLSKAVTKA


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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