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Report for CCDS24419.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
24419.1 Public Mus musculus 11 Ppia 23 108 98 CCDS HistoryNCBI Gene:268373Re-query CCDS DB by CCDS ID:24419.1See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 24419.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000132846.1 ENSMUSP00000117987.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000132846.1Link to Ensembl Protein Viewer:ENSMUSP00000117987.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000132846Re-query CCDS DB by Protein ID:ENSMUSP00000117987
Original member Current member NCBI NM_008907.2 NP_032933.1 Accepted alive Link to Nucleotide Sequence:NM_008907.2Link to Protein Sequence:NP_032933.1Re-query CCDS DB by Nucleotide ID:NM_008907Re-query CCDS DB by Protein ID:NP_032933Link to BLAST:NP_032933.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_032933.1 164 P17742 164 100% 0 0

Chromosomal Locations for CCDS 24419.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 11 (NC_000077.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 6415911 6415979 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 6418101 6418131 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 6418226 6418314 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 6419113 6419285 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 6419478 6419610 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (495 nt):
ATGGTCAACCCCACCGTGTTCTTCGACATCACGGCCGATGACGAGCCCTTGGGCCGCGTCTCCTTCGAGC
TGTTTGCAGACAAAGTTCCAAAGACAGCAGAAAACTTTCGAGCTCTGAGCACTGGAGAGAAAGGATTTGG
CTATAAGGGTTCCTCCTTTCACAGAATTATTCCAGGATTCATGTGCCAGGGTGGTGACTTTACACGCCAT
AATGGCACTGGCGGCAGGTCCATCTACGGAGAGAAATTTGAGGATGAGAACTTCATCCTAAAGCATACAG
GTCCTGGCATCTTGTCCATGGCAAATGCTGGACCAAACACAAACGGTTCCCAGTTTTTTATCTGCACTGC
CAAGACTGAATGGCTGGATGGCAAGCATGTGGTCTTTGGGAAGGTGAAAGAAGGCATGAACATTGTGGAA
GCCATGGAGCGTTTTGGGTCCAGGAATGGCAAGACCAGCAAGAAGATCACCATTTCCGACTGTGGACAGC
TCTAA

Translation (164 aa):
MVNPTVFFDITADDEPLGRVSFELFADKVPKTAENFRALSTGEKGFGYKGSSFHRIIPGFMCQGGDFTRH
NGTGGRSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVE
AMERFGSRNGKTSKKITISDCGQL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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