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Report for CCDS35128.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
35128.1 Public Homo sapiens 9 OR1L3 24 110 108 CCDS HistoryNCBI Gene:26735Re-query CCDS DB by CCDS ID:35128.1See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 35128.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000304820.5 ENSP00000302863.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000304820.5Link to Ensembl Protein Viewer:ENSP00000302863.2Re-query CCDS DB by Nucleotide ID:ENST00000304820Re-query CCDS DB by Protein ID:ENSP00000302863
Original member Current member NCBI NM_001005234.1 NP_001005234.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001005234.1Link to Protein Sequence:NP_001005234.1Re-query CCDS DB by Nucleotide ID:NM_001005234Re-query CCDS DB by Protein ID:NP_001005234Link to BLAST:NP_001005234.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001005234.1 324 Q8NH93 324 100% 0 0

Chromosomal Locations for CCDS 35128.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 122675130 122676104 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (975 nt):
ATGGGAATGTCCAACCTGACAAGACTCTCTGAATTTATTCTCTTGGGACTCTCCTCTCGGTCTGAAGACC
AGAGGCCACTCTTTGCCCTCTTTCTTATCATATACCTGGTCACTTTGATGGGAAATCTGCTCATCATCTT
GGCTATCCACTCTGATCCTCGACTTCAAAACCCTATGTATTTTTTCCTAAGCATCTTGTCCTTTGCTGAT
ATTTGCTACACAACAGTCATAGTCCCAAAGATGCTCGTGAACTTCTTATCAGAGAAAAAGACCATTTCCT
ATGCTGAATGTCTGGCACAGATGTATTTCTTCCTGGTTTTTGGAAACATAGATAGTTATCTCCTGGCGGC
TATGGCCATCAACCGCTGTGTAGCCATTTGTAACCCATTCCATTATGTCACTGTTATGAACCGCAGATGC
TGTGTGTTGCTACTAGCATTCCCCATCACTTTCTCCTATTTCCACTCTCTCCTACATGTCCTCCTGGTGA
ATCGGCTCACCTTTTGTACATCAAATGTTATCCATCATTTTTTTTGTGATGTCAACCCTGTGCTGAAACT
GTCCTGCTCCTCCACCTTTGTCAATGAAATTGTGGCCATGACAGAAGGGCTGGCCTCTGTGATGGCTCCA
TTTGTCTGTATCATCATCTCTTATCTAAGAATTCTCATCGCTGTTCTCAAGATTCCCTCAGCAGCTGGAA
AACACAAAGCCTTCTCCACCTGCAGCTCCCATCTCACTGTGGTGATTCTGTTTTATGGGAGTATTAGCTA
TGTCTATTTGCAGCCTTTGTCCAGCTATACTGTCAAGGACCGAATAGCAACAATCAACTACACTGTGTTG
ACATCAGTGTTGAACCCATTTATCTACAGTTTAAGAAACAAAGACATGAAACGGGGCTTACAGAAATTGA
TAAACAAGATTAAGTCTCAAATGAGTAGGTTCTCTACAAAGACCAATAAAATCTGTGGACCCTGA

Translation (324 aa):
MGMSNLTRLSEFILLGLSSRSEDQRPLFALFLIIYLVTLMGNLLIILAIHSDPRLQNPMYFFLSILSFAD
ICYTTVIVPKMLVNFLSEKKTISYAECLAQMYFFLVFGNIDSYLLAAMAINRCVAICNPFHYVTVMNRRC
CVLLLAFPITFSYFHSLLHVLLVNRLTFCTSNVIHHFFCDVNPVLKLSCSSTFVNEIVAMTEGLASVMAP
FVCIIISYLRILIAVLKIPSAAGKHKAFSTCSSHLTVVILFYGSISYVYLQPLSSYTVKDRIATINYTVL
TSVLNPFIYSLRNKDMKRGLQKLINKIKSQMSRFSTKTNKICGP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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