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Report for CCDS13528.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
13528.1 Public Homo sapiens 20 GMEB2 24 110 108 CCDS HistoryNCBI Gene:26205Re-query CCDS DB by CCDS ID:13528.1See the combined annotation on chromosome 20 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 13528.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000266068.5 ENSP00000266068.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000266068.5Link to Ensembl Protein Viewer:ENSP00000266068.1Re-query CCDS DB by Nucleotide ID:ENST00000266068Re-query CCDS DB by Protein ID:ENSP00000266068
Original member Current member EBI ENST00000370077.2 ENSP00000359094.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000370077.2Link to Ensembl Protein Viewer:ENSP00000359094.1Re-query CCDS DB by Nucleotide ID:ENST00000370077Re-query CCDS DB by Protein ID:ENSP00000359094
Original member Current member NCBI NM_012384.5 NP_036516.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_012384.5Link to Protein Sequence:NP_036516.1Re-query CCDS DB by Nucleotide ID:NM_012384Re-query CCDS DB by Protein ID:NP_036516Link to BLAST:NP_036516.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_036516.1 530 Q9UKD1 530 100% 0 0

Chromosomal Locations for CCDS 13528.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 20 (NC_000020.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20See the combined annotation on chromosome 20 in Sequence Viewer

Chromosome Start Stop Links
20 63590089 63590729 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 63592022 63592144 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 63592533 63592670 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 63593011 63593082 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 63595610 63595767 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 63597757 63597860 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 63602965 63603092 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 63604743 63604840 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 63619267 63619397 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1593 nt):
ATGGCGACTCCCGACGTGAGTGTGCACATGGAGGAGGTGGTGGTTGTGACAACTCCGGACACTGCAGTGG
ACGGCAGTGGTGTGGAGGGGGTGAAGACCGTGTTGGTGACGACCAACTTGGCCCCTCACGGGGGCGACCT
GACGGAAGATAACATGGAGACAGAAAATGCAGCGGCAGCAGCTGCCGCGGCCTTCACAGCCTCCTCCCAG
CTCAAGGAAGCCGTGTTAGTGAAGATGGCTGAAGAGGGGGAGAACCTGGAAGCTGAGATTGTGTACCCCA
TCACCTGTGGAGACAGCAGAGCCAACCTCATCTGGAGGAAGTTTGTGTGTCCCGGCATCAATGTGAAATG
TGTTCAGTACGACGAGCATGTAATCAGCCCAAAGGAATTTGTGCACCTGGCCGGGAAGTCCACCCTGAAG
GACTGGAAGAGAGCCATCCGCATGAACGGCATCATGCTCAGGAAGATCATGGACTCCGGGGAACTGGACT
TCTACCAGCATGACAAGGTCTGCTCCAACACCTGCCGCAGCACAAAGATTGACCTCTCAGGAGCCCGTGT
GTCCCTGAGCAGCCCCACGTCGGCCGAGTACATTCCCCTCACGCCCGCCGCAGCCGACGTGAATGGGTCT
CCTGCGACCATCACCATAGAGACCTGTGAAGACCCTGGCGACTGGACCGCGGCCATTGGAGATGACACAT
TTACCTTCTGGCGGGGGCTGAAGGACGCCGGCCTGCTGGACGAGGTCATCCAGGAGTTCCACCAGGAGCT
GGTGGAGACCATGAGAGGCCTGCAGCAGCGGGTCCAGGACCCTCCCCTGCAGCTTCGAGATGCTGTACTT
CTCAACAACATCGTGCAGAACTTCGGCATGCTGGACCTGGTGAAGAAGGTGCTGGCCAGCCACAAGTGCC
AGATGGACCGCTCGCGGGAGCAGTACGCCCGGGACCTGGCAGCCCTGGAGCAGCAGTGTGATGAGCATCG
TCGCCGAGCCAAGGAGCTGAAGCACAAGTCCCAGCACCTCAGCAACGTGCTCATGACGCTGACGCCGGTC
TCCCTGCCACCGCCTGTGAAGCGGCCCCGGCTTGCACGTGCCACATCAGGACCGGCCGCCATGGCCTCGC
AGGTGCTCACCCAGTCTGCCCAGCTGGCGCTTGGCCCGGGCGTGCCCGTCCCCCAGCTGACCAGCGTGCC
CCTTGGTAAAGTGGTGTCCACCCTGCCGTCCACCGTCCTGGGCAAGGGTTCCCTTCAGGCGCCCCCCGCC
AGCTCCCCGGCCTCCCCGCTGCTCGGGGGATACACAGTCTTGGCCTCTTCCGGCTCCACCTACCCCAGCA
CAGTGGAGATCCACCCGGACGCGTCCAGCCTCACGGTCCTGAGCACGGCCGCCGTGCAGGACGGTAGCAC
GGTGTTCAAGGTGGTCAGCCCGCTACAGCTGCTCACGTTGCCTGGCCTGGGCCCCACCCTGCAGAACGTG
GCCCAGGCCTCGCCTGGCTCCAGCACAATTGTGACAGTGCCCGCAGGGGCTGCCCCCGGGCCTGAGGAGC
ACACGGCCACCATTGAGGTGGCTGCCATGGCAGAGGACCACGAGCGGAAGTAG

Translation (530 aa):
MATPDVSVHMEEVVVVTTPDTAVDGSGVEGVKTVLVTTNLAPHGGDLTEDNMETENAAAAAAAAFTASSQ
LKEAVLVKMAEEGENLEAEIVYPITCGDSRANLIWRKFVCPGINVKCVQYDEHVISPKEFVHLAGKSTLK
DWKRAIRMNGIMLRKIMDSGELDFYQHDKVCSNTCRSTKIDLSGARVSLSSPTSAEYIPLTPAAADVNGS
PATITIETCEDPGDWTAAIGDDTFTFWRGLKDAGLLDEVIQEFHQELVETMRGLQQRVQDPPLQLRDAVL
LNNIVQNFGMLDLVKKVLASHKCQMDRSREQYARDLAALEQQCDEHRRRAKELKHKSQHLSNVLMTLTPV
SLPPPVKRPRLARATSGPAAMASQVLTQSAQLALGPGVPVPQLTSVPLGKVVSTLPSTVLGKGSLQAPPA
SSPASPLLGGYTVLASSGSTYPSTVEIHPDASSLTVLSTAAVQDGSTVFKVVSPLQLLTLPGLGPTLQNV
AQASPGSSTIVTVPAGAAPGPEEHTATIEVAAMAEDHERK


Links Key
 Links to:   History report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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