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Report for CCDS6674.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
6674.1 Public Homo sapiens 9 GAS1 24 110 108 CCDS HistoryNCBI Gene:2619Re-query CCDS DB by CCDS ID:6674.1See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 6674.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000298743.9 ENSP00000298743.7 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000298743.9Link to Ensembl Protein Viewer:ENSP00000298743.7Re-query CCDS DB by Nucleotide ID:ENST00000298743Re-query CCDS DB by Protein ID:ENSP00000298743
Original member Current member NCBI NM_002048.3 NP_002039.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_002048.3Link to Protein Sequence:NP_002039.2Re-query CCDS DB by Nucleotide ID:NM_002048Re-query CCDS DB by Protein ID:NP_002039Link to BLAST:NP_002039.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_002039.2 345 P54826 345 100% 0 0

Chromosomal Locations for CCDS 6674.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 86945742 86946779 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1038 nt):
ATGGTGGCCGCGCTGCTGGGCGGCGGCGGCGAGGCCCGCGGGGGGACAGTGCCGGGCGCCTGGCTGTGCC
TGATGGCGCTGCTGCAGCTGCTGGGCTCGGCGCCGCGGGGATCGGGGCTGGCGCACGGCCGCCGCCTCAT
CTGCTGGCAGGCGCTGCTGCAGTGCCAGGGGGAGCCGGAGTGCAGCTACGCCTACAACCAGTACGCCGAG
GCGTGCGCGCCGGTGCTGGCGCAGCACGGCGGGGGCGACGCGCCCGGGGCCGCCGCCGCCGCTTTCCCGG
CCTCGGCCGCCTCTTTCTCGTCGCGCTGGCGCTGCCCGAGTCACTGCATCTCGGCCCTCATTCAGCTCAA
CCACACGCGCCGCGGGCCCGCCCTGGAGGACTGTGACTGCGCGCAGGACGAGAACTGCAAGTCCACCAAG
CGCGCCATTGAGCCGTGCCTGCCCCGGACGAGCGGCGGCGGCGCGGGCGGCCCCGGCGCGGGCGGGGTCA
TGGGCTGCACCGAGGCCCGGCGGCGCTGCGACCGCGACAGCCGCTGCAACCTGGCGCTGAGCCGCTACCT
GACCTACTGCGGCAAAGTCTTCAACGGGCTGCGCTGCACGGACGAATGCCGCACCGTCATTGAGGACATG
CTGGCTATGCCCAAGGCGGCGCTGCTCAACGACTGCGTGTGCGACGGCCTCGAGCGGCCCATCTGCGAGT
CGGTCAAGGAGAACATGGCCCGCCTGTGCTTCGGCGCCGAGCTGGGCAACGGCCCCGGCAGCAGCGGCTC
GGACGGGGGCCTGGACGACTACTACGATGAGGACTACGATGACGAGCAGCGCACCGGGGGCGCGGGTGGT
GAGCAGCCGCTGGACGACGACGACGGCGTCCCGCACCCACCGCGCCCGGGCAGCGGCGCTGCTGCATCGG
GCGGCCGCGGGGACCTGCCCTATGGGCCTGGGCGCAGGAGCAGCGGCGGCGGCGGCCGCTTGGCGCCCCG
GGGCGCCTGGACCCCACTCGCCTCCATCTTGCTGCTGCTGCTTGGGCCGCTCTTTTAG

Translation (345 aa):
MVAALLGGGGEARGGTVPGAWLCLMALLQLLGSAPRGSGLAHGRRLICWQALLQCQGEPECSYAYNQYAE
ACAPVLAQHGGGDAPGAAAAAFPASAASFSSRWRCPSHCISALIQLNHTRRGPALEDCDCAQDENCKSTK
RAIEPCLPRTSGGGAGGPGAGGVMGCTEARRRCDRDSRCNLALSRYLTYCGKVFNGLRCTDECRTVIEDM
LAMPKAALLNDCVCDGLERPICESVKENMARLCFGAELGNGPGSSGSDGGLDDYYDEDYDDEQRTGGAGG
EQPLDDDDGVPHPPRPGSGAAASGGRGDLPYGPGRRSSGGGGRLAPRGAWTPLASILLLLLGPLF


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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