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Report for CCDS21581.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21581.1 Public Mus musculus 7 Or52z14 23 108 98 CCDS HistoryNCBI Gene:259080Re-query CCDS DB by CCDS ID:21581.1See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 21581.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000098196.4 ENSMUSP00000095798.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000098196.4Link to Ensembl Protein Viewer:ENSMUSP00000095798.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000098196Re-query CCDS DB by Protein ID:ENSMUSP00000095798
Original member Current member EBI ENSMUST00000215732.2 ENSMUSP00000150630.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000215732.2Link to Ensembl Protein Viewer:ENSMUSP00000150630.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000215732Re-query CCDS DB by Protein ID:ENSMUSP00000150630
Original member Current member NCBI NM_147076.2 NP_667287.2 Accepted alive Link to Nucleotide Sequence:NM_147076.2Link to Protein Sequence:NP_667287.2Re-query CCDS DB by Nucleotide ID:NM_147076Re-query CCDS DB by Protein ID:NP_667287Link to BLAST:NP_667287.2

Chromosomal Locations for CCDS 21581.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 103603656 103604618 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (963 nt):
ATGACATCATCAACATATTTAAATCACACCATTCTCAGAGACATCTGGTACACTATGATTGGGATCCCAG
GACTAGAAGATGCACACATTTGGCTCTCCATCCCCATCTTTTCTATGTATATAGTAGCTGTTATAGGCAA
TACATTCCTAATATTGCTGATCTCTATTGAGCATAGTCTTCATGAACCCATGTACTTTTTCCTAACTATG
TTGGCCCTGGCCGATATCTTCTTGTCCACAGTGACCATTCCAAAGGTATTAGCAATTTTCTGGTTCCAAG
ATAGAAGCATTTCTTTTGCTAGCTGTGTGTCTCAGATGTTTTTCCTCCACTTCATCTTTGTGACAGAGTC
TGGTATACTACTCTCCATGGCATTTGACCGTTATGTTGCTATCTGCTATCCACTAAGATACACCACCATT
CTAACCCCATCTGTCATCATCAAAATGGGCATTGCAGCTGTGACTAGAAGTTTTTTCATCTGCTTCCCCC
TGATCTTTCTTGTCTATAGGCTCACCTATTGTGGGAAGAGCATCATTCGTCACTCATACTGTGAACACAT
GGGCATTGCCAGGTTGGCCTGTGACAGCATCAAAGTCAATATTTACTATGGATTGATTGTAGCTCTATTT
TCCATATTTCTAGACGTAGTACTTATTATTGTCTCATATGCTCGCATACTTTGTGCTGTGTACAGAATAC
CTTCCCAAGATACCAGACTCAAAGCTCTGAGTACATGTGGCTCCCATGTCTGTGTCATCCTGTTATTTTA
TATGCCAGTTTTCTTTTCTTCTCTTGGTCACCGTTTTGGAGGTGACAGCATACCACTGCATGTTCACATC
CTCCTTGCTAACCTCTATGTTGTTCTACCACCCTCCCTCAATCCCATCATTTATGGAGTAAAGACCAAGC
AAATTCAGGAGAGAGTTGTTCAGTTATTTTCTTTAAACAAGGTAATTTGTTGA

Translation (320 aa):
MTSSTYLNHTILRDIWYTMIGIPGLEDAHIWLSIPIFSMYIVAVIGNTFLILLISIEHSLHEPMYFFLTM
LALADIFLSTVTIPKVLAIFWFQDRSISFASCVSQMFFLHFIFVTESGILLSMAFDRYVAICYPLRYTTI
LTPSVIIKMGIAAVTRSFFICFPLIFLVYRLTYCGKSIIRHSYCEHMGIARLACDSIKVNIYYGLIVALF
SIFLDVVLIIVSYARILCAVYRIPSQDTRLKALSTCGSHVCVILLFYMPVFFSSLGHRFGGDSIPLHVHI
LLANLYVVLPPSLNPIIYGVKTKQIQERVVQLFSLNKVIC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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