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Report for CCDS481.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
481.1 Public Homo sapiens 1 C1orf210 24 110 108 CCDS HistoryNCBI Gene:149466Re-query CCDS DB by CCDS ID:481.1Re-query CCDS DB by GeneID:149466See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 481.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000423420.1 ENSP00000429399.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000423420.1Link to Ensembl Protein Viewer:ENSP00000429399.1Re-query CCDS DB by Nucleotide ID:ENST00000423420Re-query CCDS DB by Protein ID:ENSP00000429399
Original member Current member EBI ENST00000523677.6 ENSP00000430918.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000523677.6Link to Ensembl Protein Viewer:ENSP00000430918.1Re-query CCDS DB by Nucleotide ID:ENST00000523677Re-query CCDS DB by Protein ID:ENSP00000430918
Original member Current member NCBI NM_001164829.2 NP_001158301.1 Accepted alive Link to Nucleotide Sequence:NM_001164829.2Link to Protein Sequence:NP_001158301.1Re-query CCDS DB by Nucleotide ID:NM_001164829Re-query CCDS DB by Protein ID:NP_001158301Link to BLAST:NP_001158301.1
Original member Current member NCBI NM_182517.3 NP_872323.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_182517.3Link to Protein Sequence:NP_872323.1Re-query CCDS DB by Nucleotide ID:NM_182517Re-query CCDS DB by Protein ID:NP_872323Link to BLAST:NP_872323.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001158301.1 113 Q8IVY1 113 100% 0 0
NP_872323.1 113 Q8IVY1 113 100% 0 0

Chromosomal Locations for CCDS 481.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 43282785 43283107 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 43283252 43283270 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (342 nt):
ATGAATGAGACAAACAAAACACTTGTTGGGCCTTCGGAGCTCCCCACAGCGTCTGCTGTGGCCCCTGGCC
CAGGCACTGGGGCTCGGGCATGGCCTGTGCTGGTAGGATTTGTGCTGGGGGCTGTGGTCCTCTCGCTCCT
CATTGCACTTGCTGCCAAATGCCACCTCTGCCGCCGATACCATGCCAGCTACCGGCACCGCCCACTGCCT
GAGACAGGAAGGGGAGGCCGCCCACAGGTGGCTGAAGATGAGGATGATGATGGCTTCATCGAGGACAATT
ACATTCAGCCTGGGACTGGCGAGCTGGGGACAGAGGGTAGCAGGGACCACTTCTCCCTCTGA

Translation (113 aa):
MNETNKTLVGPSELPTASAVAPGPGTGARAWPVLVGFVLGAVVLSLLIALAAKCHLCRRYHASYRHRPLP
ETGRGGRPQVAEDEDDDGFIEDNYIQPGTGELGTEGSRDHFSL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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