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Report for CCDS29661.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
29661.1 Public Mus musculus 19 Or5b118 23 108 98 CCDS HistoryNCBI Gene:258123Re-query CCDS DB by CCDS ID:29661.1See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 29661.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000096202.1 ENSMUSP00000093916.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000096202.1Link to Ensembl Protein Viewer:ENSMUSP00000093916.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000096202Re-query CCDS DB by Protein ID:ENSMUSP00000093916
Original member Current member EBI ENSMUST00000220113.1 ENSMUSP00000151810.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000220113.1Link to Ensembl Protein Viewer:ENSMUSP00000151810.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000220113Re-query CCDS DB by Protein ID:ENSMUSP00000151810
Original member Current member NCBI NM_001011842.1 NP_001011842.1 Accepted alive Link to Nucleotide Sequence:NM_001011842.1Link to Protein Sequence:NP_001011842.1Re-query CCDS DB by Nucleotide ID:NM_001011842Re-query CCDS DB by Protein ID:NP_001011842Link to BLAST:NP_001011842.1

Chromosomal Locations for CCDS 29661.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 19 (NC_000085.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 13470972 13471916 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (945 nt):
ATGGAGAATATTTCAGAGGTTACTGAATTTATTCTTGTAGGCTTGACAGATGCCCCAGAGCTTCAGATTC
CT
TTGTTTATTATCTTCACTCTCATTTATTTGATTGCACTGTTTGGGAATCTTGGGATGATCATACTGAT
T
CTGCTGGACTCCCGACTCCACACTCCCATGTACTTTTTCCTCTGTAATCTCTCGGTGGTGGACTGTGTT
TAT
GCCTCAGCAATCACCCCCAAGGTGATAGAAGGGTTTCTCACAGGAAGTAAGACCATATCATTAAATG
GG
TGTGCTGCCCAGATGTTCTTCTTTGTAGCCTTTGGTGCTATTGAAAGTTTGATCCTTGCCTCAATGGC
C
TATGACCGTCATGCAGCAGTGTGCAAACCCCTGCACTATACTACCATTATGACAAGTACCACCTGCATT
CTA
ATTGTCACTTGGTGCTACACTTGTGGGATCTTACAATCTTCTGTCCATGTTGCTCTGGCATTTTCTC
TT
TCCTTCTGTCATTCCAACGTAATTAATCACTTTTTCTGTGACATTCCCCCACTGCTAGACATTTCTTG
T
TCTGACACCCACACAAATGAGATTACACTGCTCGTCTTGGCTACATTAGATCTTGTTTTCACTCTCTTG
GTT
ATCTTAAACACTTACCTGCTTATTTTCATTGCTATCCTGAGGATGCGTTCAGCTGAAGCACAGAGGA
AG
GCCTTCTCTACCTGTGCATCTCATCTCATCACTGTGTCTATCTTCTTTGGTTCCCTTATATTCATGTA
C
TTACAGCCCAGTTCCAATCATTCCATGGACACAGACAAAATTGCATCTGTGTTTTATACAATGGTCATT
CCT
ATGCTGAACCCTGTGGTCTACAGCCTGAGGAACAAAGAGGTAAAAAATGCATTTAAGAAAGTTGTTG
AA
AGATTAATGTCTTCATTTCATTTAGTCCATTAA


Translation (314 aa):
MENISEVTEFILVGLTDAPELQIPLFIIFTLIYLIALFGNLGMIILILLDSRLHTPMYFFLCNLSVVDCV
Y
ASAITPKVIEGFLTGSKTISLNGCAAQMFFFVAFGAIESLILASMAYDRHAAVCKPLHYTTIMTSTTCI
L
IVTWCYTCGILQSSVHVALAFSLSFCHSNVINHFFCDIPPLLDISCSDTHTNEITLLVLATLDLVFTLL
V
ILNTYLLIFIAILRMRSAEAQRKAFSTCASHLITVSIFFGSLIFMYLQPSSNHSMDTDKIASVFYTMVI
P
MLNPVVYSLRNKEVKNAFKKVVERLMSSFHLVH




Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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