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Report for CCDS21428.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21428.1 Public Mus musculus 7 Or14a258 23 108 98 CCDS HistoryNCBI Gene:258089Re-query CCDS DB by CCDS ID:21428.1See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 21428.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000077210.2 ENSMUSP00000076449.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000077210.2Link to Ensembl Protein Viewer:ENSMUSP00000076449.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000077210Re-query CCDS DB by Protein ID:ENSMUSP00000076449
Original member Current member NCBI NM_001011828.1 NP_001011828.1 Accepted alive Link to Nucleotide Sequence:NM_001011828.1Link to Protein Sequence:NP_001011828.1Re-query CCDS DB by Nucleotide ID:NM_001011828Re-query CCDS DB by Protein ID:NP_001011828Link to BLAST:NP_001011828.1

Chromosomal Locations for CCDS 21428.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 86385657 86386658 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1002 nt):
ATGCCCAATGACACTAGAGTAACAGGGTTCATCCTTATGGGATTCTCAGCTGCTCCTGAACTACAGACTG
TATGTGGGCTGTTCTTTCTGGTAATGTACCTAGCAGTCATAATGAGTAACCTGCTCATCATCACGGTCAT
CACTCTGGATCTGAAACTCCAAACACCCATGTACTTTTTCCTAAAGAATTTGTCCCTGTTGGATGTCTTC
CTTGTGTCCATCCCAATCCCAAAGTTCATCATCAATAACCTAACTCACAACAATTACATTTCGATTCTGG
GTTGTGCCTTTCAGATACTTTTAATGACTTCGTTCTCAGCAGGTGAGATATTTGTACTGACTGCAATGTC
TTATGACCGCTATGTTGCCATTTGCTCTCCTCTGTGTTATGAGGCAATCATGAGTAGTGGTAACTGTGTG
CTGATGGTGGGTGTTTCCTGGGCTACTGGAATTCTGTTTGGAGCTTTATACACAGCTGGCACATTTTCCA
TGCCTTTCTGTGGCTCCATGGTGATCCCACAGTTTTTCTGTGATGTTCCCTCGTTACTAAGGATTTCCTG
CTCTGGATCACTCATGATCATTTATATAAGTCTTGGGATCGGTATGTGTCTATGCATGTCTTGCTTTTAC
TGTGTTATGATATCCTACTTTTACATTATCTCCACTGTGCTGAAGATTCCTACCACTAGAGGTCAGTCCA
AAGCATTTGCCACCTGCATCCCCCACCTCACTGTTTTCAGTGTTTTTATTGCCACTGCTTGCTTTGTCTA
TCTGAAGCCTCCCTCAGATATACCGTCTATTACAGACAGACTGTTTTCTGTGCTGTATACTGTGCTGCCT
CCAGCACTTAATCCTGTGATCTACAGCCTGAGGAACAGTGATGTCAAGTGTTCTCTGAGGAGGTTGCAGC
AAAATCTCTGTCCCAGGGATTCATACTACTTAACAGTTCAGCGTTTCTGTCAGTGTTATAGTGCCTCACA
AGTTACAAGCAAGTGTTTTTAA

Translation (333 aa):
MPNDTRVTGFILMGFSAAPELQTVCGLFFLVMYLAVIMSNLLIITVITLDLKLQTPMYFFLKNLSLLDVF
LVSIPIPKFIINNLTHNNYISILGCAFQILLMTSFSAGEIFVLTAMSYDRYVAICSPLCYEAIMSSGNCV
LMVGVSWATGILFGALYTAGTFSMPFCGSMVIPQFFCDVPSLLRISCSGSLMIIYISLGIGMCLCMSCFY
CVMISYFYIISTVLKIPTTRGQSKAFATCIPHLTVFSVFIATACFVYLKPPSDIPSITDRLFSVLYTVLP
PALNPVIYSLRNSDVKCSLRRLQQNLCPRDSYYLTVQRFCQCYSASQVTSKCF


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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