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Report for CCDS12383.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12383.1 Public Homo sapiens 19 TMEM59L 24 110 108 CCDS HistoryNCBI Gene:25789Re-query CCDS DB by CCDS ID:12383.1See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12383.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000262817.8 ENSP00000262817.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000262817.8Link to Ensembl Protein Viewer:ENSP00000262817.3Re-query CCDS DB by Nucleotide ID:ENST00000262817Re-query CCDS DB by Protein ID:ENSP00000262817
Original member Current member EBI ENST00000600490.5 ENSP00000470879.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000600490.5Link to Ensembl Protein Viewer:ENSP00000470879.1Re-query CCDS DB by Nucleotide ID:ENST00000600490Re-query CCDS DB by Protein ID:ENSP00000470879
Original member Current member NCBI NM_012109.3 NP_036241.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_012109.3Link to Protein Sequence:NP_036241.1Re-query CCDS DB by Nucleotide ID:NM_012109Re-query CCDS DB by Protein ID:NP_036241Link to BLAST:NP_036241.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_036241.1 342 Q9UK28 342 100% 0 0

Chromosomal Locations for CCDS 12383.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 18612959 18613129 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 18613872 18614016 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 18614104 18614195 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 18615975 18616127 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 18617000 18617102 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 18618155 18618272 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 18618375 18618492 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 18620408 18620536 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1029 nt):
ATGGCTGCGGTGGCGCTGATGCCACCGCCGCTGCTGCTGCTGCTGCTGTTGGCGTCGCCGCCCGCCGCCT
CCGCGCCGTCCGCCCGCGATCCCTTCGCCCCCCAGCTCGGGGACACGCAGAACTGCCAGCTGCGGTGCCG
CGACCGCGACCTCGGCCCGCAGCCCTCGCAGGCGGGGCTGGAGGGCGCCTCCGAGTCTCCCTATGACAGA
GCCGTTCTGATCAGCGCTTGCGAGCGTGGCTGCCGCCTCTTCTCCATCTGCCGATTTGTGGCCAGAAGCT
CCAAGCCCAATGCCACCCAAACTGAGTGTGAAGCAGCCTGCGTGGAAGCCTATGTGAAGGAGGCAGAGCA
GCAGGCCTGTAGCCACGGCTGCTGGAGCCAGCCCGCGGAGCCTGAGCCGGAGCAGAAGAGAAAGGTCCTG
GAGGCTCCAAGTGGGGCCCTCTCCCTCTTGGACTTGTTTTCCACCCTCTGCAATGACCTTGTCAACTCAG
CCCAGGGATTTGTCTCCTCCACCTGGACATACTACTTGCAGACTGACAATGGGAAAGTGGTGGTGTTTCA
GACTCAGCCCATAGTGGAGAGCCTCGGCTTCCAGGGGGGCCGTCTGCAGCGCGTGGAGGTGACCTGGCGA
GGCTCCCACCCTGAAGCCCTGGAGGTGCACGTGGACCCTGTAGGCCCCCTGGACAAGGTGAGGAAGGCCA
AGATCCGAGTCAAGACCAGCAGCAAGGCCAAGGTGGAGTCTGAAGAGCCACAGGACAATGACTTCCTCAG
TTGCATGTCCCGGCGCTCGGGTCTGCCTCGCTGGATCCTGGCCTGCTGCCTCTTCCTCTCCGTGCTGGTG
ATGCTGTGGCTGAGCTGCTCCACCCTGGTGACCGCGCCTGGCCAGCACCTCAAGTTCCAGCCTCTGACCC
TGGAGCAGCACAAGGGCTTCATGATGGAGCCCGATTGGCCCCTGTACCCGCCGCCGTCCCACGCCTGTGA
GGACAGCCTACCACCCTACAAGCTGAAGCTGGACCTGACCAAGCTGTAG

Translation (342 aa):
MAAVALMPPPLLLLLLLASPPAASAPSARDPFAPQLGDTQNCQLRCRDRDLGPQPSQAGLEGASESPYDR
AVLISACERGCRLFSICRFVARSSKPNATQTECEAACVEAYVKEAEQQACSHGCWSQPAEPEPEQKRKVL
EAPSGALSLLDLFSTLCNDLVNSAQGFVSSTWTYYLQTDNGKVVVFQTQPIVESLGFQGGRLQRVEVTWR
GSHPEALEVHVDPVGPLDKVRKAKIRVKTSSKAKVESEEPQDNDFLSCMSRRSGLPRWILACCLFLSVLV
MLWLSCSTLVTAPGQHLKFQPLTLEQHKGFMMEPDWPLYPPPSHACEDSLPPYKLKLDLTKL


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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