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Report for CCDS18698.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
18698.1 Public Mus musculus 4 Eif3i 23 108 98 CCDS HistoryNCBI Gene:54709Re-query CCDS DB by CCDS ID:18698.1Re-query CCDS DB by GeneID:54709See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 18698.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000102593.10 ENSMUSP00000099653.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000102593.10Link to Ensembl Protein Viewer:ENSMUSP00000099653.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000102593Re-query CCDS DB by Protein ID:ENSMUSP00000099653
Original member Current member NCBI NM_018799.2 NP_061269.1 Accepted alive Link to Nucleotide Sequence:NM_018799.2Link to Protein Sequence:NP_061269.1Re-query CCDS DB by Nucleotide ID:NM_018799Re-query CCDS DB by Protein ID:NP_061269Link to BLAST:NP_061269.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_061269.1 325 Q9QZD9 325 100% 0 0

Chromosomal Locations for CCDS 18698.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 4 (NC_000070.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 129592053 129592134 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 129592267 129592359 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 129592997 129593070 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 129593342 129593431 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 129593526 129593636 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 129595059 129595186 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 129595264 129595413 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 129596874 129596939 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 129598955 129599042 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 129600409 129600501 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 129600594 129600596 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (978 nt):
ATGAAACCCATCCTGCTGCAGGGCCATGAGCGGTCCATCACGCAGATCAAGTATAACCGCGAAGGAGACC
TTCTCTTCACCGTGGCCAAAGACCCTATCGTCAACGTGTGGTACTCTGTCAATGGGGAGAGGCTAGGCAC
CTACATGGGCCACACTGGAGCTGTGTGGTGCGTGGATGCTGACTGGGACACCAAGCATGTCCTTACTGGC
TCAGCTGACAACAGCTGTCGTCTCTGGGACTGTGAAACAGGGAAGCAGCTGGCCCTACTCAAGACCAACT
CAGCTGTCCGGACCTGCGGCTTTGACTTTGGGGGCAACATCATCATGTTCTCCACAGACAAGCAGATGGG
GTATCAGTGCTTCGTGAGCTTCTTTGATCTGCGGGATCCAAGCCAGATCGACAGCAACGAGCCCTACATG
AAGATCCCCTGTAATGATTCCAAGATCACCAGTGCCGTCTGGGGCCCCCTCGGGGAGTGCGTCATCGCAG
GCCACGAGAGCGGAGAGCTCAACCAGTATAGCGCCAAGTCTGGAGAGGTGTTGGTGAACGTAAAGGAACA
CTCTCGGCAGATCAATGACATCCAGTTGTCTAGAGACATGACCATGTTTGTCACTGCATCTAAGGACAAC
ACAGCTAAGCTCTTCGACTCCACGACTCTTGAACATCAGAAGACTTTCCGAACAGAGCGTCCTGTCAACT
CGGCTGCTCTCTCTCCCAACTATGACCATGTGGTGCTGGGAGGAGGTCAGGAAGCCATGGATGTGACCAC
AACCTCCACCAGGATTGGCAAGTTTGAGGCCAGGTTCTTCCATTTGGCTTTTGAGGAAGAGTTTGGAAGA
GTCAAGGGCCACTTTGGACCGATCAACAGCGTTGCCTTCCATCCTGATGGCAAGAGCTACAGCAGCGGTG
GCGAAGATGGTTACGTCCGCATCCACTACTTCGACCCACAGTACTTTGAGTTCGAGTTTGAGGCCTAA

Translation (325 aa):
MKPILLQGHERSITQIKYNREGDLLFTVAKDPIVNVWYSVNGERLGTYMGHTGAVWCVDADWDTKHVLTG
SADNSCRLWDCETGKQLALLKTNSAVRTCGFDFGGNIIMFSTDKQMGYQCFVSFFDLRDPSQIDSNEPYM
KIPCNDSKITSAVWGPLGECVIAGHESGELNQYSAKSGEVLVNVKEHSRQINDIQLSRDMTMFVTASKDN
TAKLFDSTTLEHQKTFRTERPVNSAALSPNYDHVVLGGGQEAMDVTTTSTRIGKFEARFFHLAFEEEFGR
VKGHFGPINSVAFHPDGKSYSSGGEDGYVRIHYFDPQYFEFEFEA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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