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Report for CCDS36070.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
36070.1 Public Mus musculus 10 Il22 23 108 98 CCDS HistoryNCBI Gene:50929Re-query CCDS DB by CCDS ID:36070.1Re-query CCDS DB by GeneID:50929See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 36070.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000096691.4 ENSMUSP00000094449.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000096691.4Link to Ensembl Protein Viewer:ENSMUSP00000094449.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000096691Re-query CCDS DB by Protein ID:ENSMUSP00000094449
Original member Current member NCBI NM_016971.2 NP_058667.1 Accepted alive Link to Nucleotide Sequence:NM_016971.2Link to Protein Sequence:NP_058667.1Re-query CCDS DB by Nucleotide ID:NM_016971Re-query CCDS DB by Protein ID:NP_058667Link to BLAST:NP_058667.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_058667.1 179 Q9JJY9 179 100% 0 0

Chromosomal Locations for CCDS 36070.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 10 (NC_000076.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 118204991 118205176 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 118205570 118205635 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 118205735 118205878 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 118206846 118206911 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 118209449 118209526 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (540 nt):
ATGGCTGTCCTGCAGAAATCTATGAGTTTTTCCCTTATGGGGACTTTGGCCGCCAGCTGCCTGCTTCTCA
TTGCCCTGTGGGCCCAGGAGGCAAATGCGCTGCCCGTCAACACCCGGTGCAAGCTTGAGGTGTCCAACTT
CCAGCAGCCATACATCGTCAACCGCACCTTTATGCTGGCCAAGGAGGCCAGCCTTGCAGATAACAACACA
GATGTCCGGCTCATCGGGGAGAAACTGTTCCGAGGAGTCAGTGCTAAGGATCAGTGCTACCTGATGAAGC
AGGTGCTCAACTTCACCCTGGAAGACGTTCTGCTCCCCCAGTCAGACAGGTTCCAGCCCTACATGCAGGA
GGTGGTGCCTTTCCTGACCAAACTCAGCAATCAGCTCAGCTCCTGTCACATCAGCGGTGACGACCAGAAC
ATCCAGAAGAATGTCAGAAGGCTGAAGGAGACAGTGAAAAAGCTTGGAGAGAGTGGAGAGATCAAGGCGA
TTGGGGAACTGGACCTGCTGTTTATGTCTCTGAGAAATGCTTGCGTCTGA

Translation (179 aa):
MAVLQKSMSFSLMGTLAASCLLLIALWAQEANALPVNTRCKLEVSNFQQPYIVNRTFMLAKEASLADNNT
DVRLIGEKLFRGVSAKDQCYLMKQVLNFTLEDVLLPQSDRFQPYMQEVVPFLTKLSNQLSSCHISGDDQN
IQKNVRRLKETVKKLGESGEIKAIGELDLLFMSLRNACV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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