NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS36090.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
36090.1 Public Mus musculus 10 Rps26 23 108 98 CCDS HistoryNCBI Gene:27370Re-query CCDS DB by CCDS ID:36090.1Re-query CCDS DB by GeneID:27370See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 36090.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000026420.6 ENSMUSP00000026420.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000026420.6Link to Ensembl Protein Viewer:ENSMUSP00000026420.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000026420Re-query CCDS DB by Protein ID:ENSMUSP00000026420
Original member Current member NCBI NM_013765.2 NP_038793.2 Accepted alive Link to Nucleotide Sequence:NM_013765.2Link to Protein Sequence:NP_038793.2Re-query CCDS DB by Nucleotide ID:NM_013765Re-query CCDS DB by Protein ID:NP_038793Link to BLAST:NP_038793.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_038793.2 115 P62855 115 100% 0 0

Chromosomal Locations for CCDS 36090.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 10 (NC_000076.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 128624601 128624636 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128625207 128625337 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128626063 128626240 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128626476 128626478 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (348 nt):
ATGACCAAAAAAAGAAGAAACAACGGTCGCGCCAAAAAGGGCCGCGGCCATGTGCAGCCCATTCGCTGCA
CGAACTGCGCCCGGTGCGTGCCCAAGGATAAGGCCATCAAGAAGTTTGTCATTCGGAACATTGTAGAAGC
CGCTGCTGTCAGGGACATATCTGAAGCAAGCGTCTTCGACGCCTACGTGCTTCCCAAGCTCTATGTCAAG
CTGCATTATTGCGTGAGCTGTGCCATCCATAGCAAGGTTGTTAGGAATCGATCCCGCGAGGCCCGGAAGG
ACCGAACACCCCCACCACGATTCAGACCTGCTGGCGCTGCACCTCGACCTCCACCAAAGCCCATGTAA

Translation (115 aa):
MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDAYVLPKLYVK
LHYCVSCAIHSKVVRNRSREARKDRTPPPRFRPAGAAPRPPPKPM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH