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Report for CCDS85340.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
85340.1 Public Mus musculus 7 Gab2 23 108 98 CCDS HistoryNCBI Gene:14389Re-query CCDS DB by CCDS ID:85340.1Re-query CCDS DB by GeneID:14389See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 21, NCBI annotation release 106, Ensembl annotation release 86

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 85340.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000206791.1 ENSMUSP00000146200.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000206791.1Link to Ensembl Protein Viewer:ENSMUSP00000146200.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000206791Re-query CCDS DB by Protein ID:ENSMUSP00000146200
Original member Current member NCBI NM_001162477.1 NP_001155949.1 Accepted alive Link to Nucleotide Sequence:NM_001162477.1Link to Protein Sequence:NP_001155949.1Re-query CCDS DB by Nucleotide ID:NM_001162477Re-query CCDS DB by Protein ID:NP_001155949Link to BLAST:NP_001155949.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001155949.1 665 Q9Z1S8 665 99.8496% 0 1

Chromosomal Locations for CCDS 85340.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 97081826 97081906 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 97223473 97223773 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 97271802 97272042 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 97298828 97299402 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 97300299 97300369 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 97301371 97301635 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 97302369 97302459 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 97303027 97303129 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 97304150 97304275 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 97304876 97305019 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1998 nt):
ATGAGCGGCGGCGGCGGCGACGACGTGGTGTGTACCGGCTGGCTGAGGAAATCGCCTCCCGAGAAGAAGT
TGAGGCGCTATGCCTGGAAGAAACGCTGGTTTATACTTCGGAGTGGCCGAATGAGTGGAGATCCAGATGT
TCTGGAATACTACAAGAATGAGCACTCCAAGAAACCCCTGCGGATCATCAACCTGAACTTGTGTGAGCAG
GTGGATGCAGGCCTGACCTTCAACAAGAAAGAGCTGCAGGATAGTTTTGTGTTTGATATCAAGACCAGCG
AGCGCACATTTTACCTGGTGGCTGAGACAGAGGCTGACATGAATAAGTGGGTCCAGAGCATCTGCCAGAT
CTGCGGCTTCAATCAGGCTGAAGAGAGCACAGACTCCCTGAGGAACCTTTCTTCAGCCAGTCATGGTCCC
CGCTCTTCTCCAGCTGAGTTCAGCTCCAGTCAGCACCTGCTCCGAGAACGGAAGTCCTCAGCCCCTTCAC
ACTCTAGCCAGCCTACTTTATTCACGTTTGAGCCCCCTGTGTCAAGCCACATGCAGCCTACCTTGTCCAC
CAGTGCACCTCAGGAGTATCTCTACTTGCACCAGTGCATAAGCAGAAGGACAGAAAATGCAAGGAGTGCC
AGCTTCTCTCAGGGCACCCGGCAGAAGAGTGATACAGCTGTGCAAAAACTTGCCCAGAGCAATGGACACT
GTATCAACGGCGTCGGAGGTCAAGTCCATGGCTTCTATAGCCTTCCCAAGCCAAGCCGACACAATACAGA
ATTCAAAGACAGTACTTATGATCTCCCACGGAGCCTGGCTTCCCATGGCCACACCAAGAGCAGCCTCACA
GGGTCTGAGACTGATAACGAGGATGTGTACACCTTCAAGATGCCCAGCAACACCCTGTGTCGGGAACTTG
GAGACCTCCTTGTGGACAATATGGATGTCCCAACCACTCCTCTCTCAGCCTACCAGATCCCTAGAACTTT
CACACTGGACAAGAACCACAATGCCATGACAGTGGCCACTCCTGGAGATTCAGCCATAGCTCCCCCACCC
CGGCCACCCAAGCCAAGTCAGGCAGAAACACCTCAATGGGGCAGCATTCAGCAAAGACCTCCAATCAGCG
AAAATAGCAGATCTGTAGCTGCTACTATCCCCAGGCGCAATACCCTCCCTGCAATGGACAACAGCCGACT
CCATCGAGCTTCTTCCTGTGAGACCTACGAGTACCCGGCACGAGGCAGTGGGGAAAGTGCCAGCTGGTCT
GCTGAACCTCCAGGAAAGACTGCCGTAGGTCGATCAAATAGTGCCAGCTCTGATGACAACTACGTGCCCA
TGAACCCAGGTTCTTCTACCCTGCTGGCTATGGAACGACCAGGGGACAACTCCCAGAGTGTCTACATCCC
CATGAGCCCAGGACCCCATCACTTTGACCCACTTGGCTACCCGTCCACAGCCCTTCCTATTCACAGAGGC
CCCAGCCGAGGAAGTGAAATCCAGCCACCCCCGGTCAACCGAAACCTCAAGCCTGACAGAAAAGCAAAGC
CAACACCCCTTGACCTGAGAAACAACACTGTCATCGATGAGCTGCCCTTCAAGTCACCTGTCACCAAGTC
TTGGTCCAGGATCAACCACACCTTTAACTCCAGTTCCTCCCAGTACTGCCGTCCTATCTCCACACAGAGC
ATCACCAGCACAGACTCGGGAGACAGTGAGGAGAACTATGTCCCTATGCAAAACCCAGTATCTGCATCCC
CTGTTCCCAGTGGCACTAACAGCCCAGCTCCAAAGAAGAGTACTGGCAGTGTGGATTATCTCGCCCTGGA
CTTCCAGCCGGGCTCCCCAAGCCCTCACCGCAAGCCATCCACATCATCTGTCACATCAGATGAGAAGGTA
GACTATGTCCAAGTGGATAAAGAGAAGACCCAGGCCCTGCAGAACACCATGCAGGAGTGGACAGATGTGC
GGCAGTCCTCCGAACCTTCCAAGGGTGCCAAGCTGTAA

Translation (665 aa):
MSGGGGDDVVCTGWLRKSPPEKKLRRYAWKKRWFILRSGRMSGDPDVLEYYKNEHSKKPLRIINLNLCEQ
VDAGLTFNKKELQDSFVFDIKTSERTFYLVAETEADMNKWVQSICQICGFNQAEESTDSLRNLSSASHGP
RSSPAEFSSSQHLLRERKSSAPSHSSQPTLFTFEPPVSSHMQPTLSTSAPQEYLYLHQCISRRTENARSA
SFSQGTRQKSDTAVQKLAQSNGHCINGVGGQVHGFYSLPKPSRHNTEFKDSTYDLPRSLASHGHTKSSLT
GSETDNEDVYTFKMPSNTLCRELGDLLVDNMDVPTTPLSAYQIPRTFTLDKNHNAMTVATPGDSAIAPPP
RPPKPSQAETPQWGSIQQRPPISENSRSVAATIPRRNTLPAMDNSRLHRASSCETYEYPARGSGESASWS
AEPPGKTAVGRSNSASSDDNYVPMNPGSSTLLAMERPGDNSQSVYIPMSPGPHHFDPLGYPSTALPIHRG
PSRGSEIQPPPVNRNLKPDRKAKPTPLDLRNNTVIDELPFKSPVTKSWSRINHTFNSSSSQYCRPISTQS
ITSTDSGDSEENYVPMQNPVSASPVPSGTNSPAPKKSTGSVDYLALDFQPGSPSPHRKPSTSSVTSDEKV
DYVQVDKEKTQALQNTMQEWTDVRQSSEPSKGAKL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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