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Report for CCDS1095.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
1095.1 Public Homo sapiens 1 DPM3 24 110 108 CCDS HistoryNCBI Gene:54344Re-query CCDS DB by CCDS ID:1095.1Re-query CCDS DB by GeneID:54344See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 1095.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000341298.3 ENSP00000344338.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000341298.3Link to Ensembl Protein Viewer:ENSP00000344338.3Re-query CCDS DB by Nucleotide ID:ENST00000341298Re-query CCDS DB by Protein ID:ENSP00000344338
Original member Current member EBI ENST00000368400.5 ENSP00000357385.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000368400.5Link to Ensembl Protein Viewer:ENSP00000357385.5Re-query CCDS DB by Nucleotide ID:ENST00000368400Re-query CCDS DB by Protein ID:ENSP00000357385
Original member Current member NCBI NM_153741.2 NP_714963.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_153741.2Link to Protein Sequence:NP_714963.1Re-query CCDS DB by Nucleotide ID:NM_153741Re-query CCDS DB by Protein ID:NP_714963Link to BLAST:NP_714963.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_714963.1 92 Q9P2X0-1 92 100% 0 0

Chromosomal Locations for CCDS 1095.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 155139962 155140240 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (279 nt):
ATGACGAAATTAGCGCAGTGGCTTTGGGGACTAGCGATCCTGGGCTCCACCTGGGTGGCCCTGACCACGG
GAGCCTTGGGCCTGGAGCTGCCCTTGTCCTGCCAGGAAGTCCTGTGGCCACTGCCCGCCTACTTGCTGGT
GTCCGCCGGCTGCTATGCCCTGGGCACTGTGGGCTATCGTGTGGCCACTTTTCATGACTGCGAGGACGCC
GCACGCGAGCTGCAGAGCCAGATACAGGAGGCCCGAGCCGACTTAGCCCGCAGGGGGCTGCGCTTCTGA

Translation (92 aa):
MTKLAQWLWGLAILGSTWVALTTGALGLELPLSCQEVLWPLPAYLLVSAGCYALGTVGYRVATFHDCEDA
ARELQSQIQEARADLARRGLRF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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