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Report for CCDS21692.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21692.1 Public Mus musculus 7 Ovch2 23 108 98 CCDS HistoryNCBI Gene:244199Re-query CCDS DB by CCDS ID:21692.1See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 21692.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000106755.2 ENSMUSP00000102366.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000106755.2Link to Ensembl Protein Viewer:ENSMUSP00000102366.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000106755Re-query CCDS DB by Protein ID:ENSMUSP00000102366
Original member Current member NCBI NM_172908.3 NP_766496.2 Accepted alive Link to Nucleotide Sequence:NM_172908.3Link to Protein Sequence:NP_766496.2Re-query CCDS DB by Nucleotide ID:NM_172908Re-query CCDS DB by Protein ID:NP_766496Link to BLAST:NP_766496.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_766496.2 609 Q7M761-1 609 100% 0 0

Chromosomal Locations for CCDS 21692.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 107781638 107781747 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 107781970 107782050 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 107784498 107784629 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 107785402 107785495 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 107788602 107788732 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 107789090 107789230 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 107790079 107790203 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 107790323 107790413 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 107792117 107792140 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 107793234 107793423 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 107793954 107794105 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 107794359 107794454 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 107794782 107794954 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 107796520 107796611 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 107798010 107798119 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 107801092 107801179 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1830 nt):
ATGCCTATCAGCAAGGACAAGCTGATTTTAATATTAGGAATGGTCTGCTTGGAACAAGGTCATTCTGAAA
CCCTTTCCTCCATAAGAAATCCTGACTGTGGGCAGAGTTTGGTTAAGCCCCAACCTCAGAATTACTTTAG
CCTTTTCAGTCGCATTGTTGGAGGAAGCCAGGTGGAAAAGGGTTCCTATCCTTGGCAAGTGTCTCTGAAA
CAAAAGCAGAAGCACATCTGTGGAGGGACCATCATCTCTTCACAGTGGGTCATCACAGCCGCTCATTGCA
TGGCTAACAGAAACATTGCATTAACTTTGAATGTAACTGCTGGAGAACATGACTTGAGCCAAGCCGAGCC
AGGAGAGCAAACACTTGCCATTGAAACCATCATCATACACCCGCAGTTCTCCACCAGAAAACCTATGATC
TATGATATAGCCCTTCTGAAGATGGCTGGAACCTTCCAATTTGGACAGTTTGTGAGGCCTGTGTGTCTTC
CAGAGCCAGGAGAACACTTTAATGCTGGATTTATTTGTACAACTGCAGGCTGGGGTCGCTTGTCCGAAGG
TGGCAGGCTCCCACAAGTCTTGCAGCAGGTAAACCTGCCAATTTTGACTCAGGAGGAATGTGAGGCCGTT
CTGTTGACCTTAAAGAATCCCATTACTGGGAAGACCTTTCTCTGCACAGGATCCCCTGATGGAGGGAGAG
ATGCTTGTCAGGGAGATTCAGGAGGGTCACTTATGTGCCAGAATAGGAAAGGGGCCTGGACTCTGGCTGG
AGTGACTTCTTGGGGTTTGGGCTGTGGTCGAAGCTGGAGAAACAATGCAAGAAAGAAAGAGCAAGGATCT
CCTGGAATCTTCACAGATCTTAGGAGAGTGCTTCCCTGGATCCTCAAACATATCCAGACTGGCCATCGAA
GGAAGAGCACCAAAGCTTTATGCAGTGAGCCTGATGGTCTCATCAGTGGGTCTGAGGGAGAGCTGCACTT
CCCAGAAAGCCTCCACCTGTACTATGAGAGCAAGCAACTGTGTGTCTGGACCTTCCTGGTTCCAGAGGAC
ATGCATATGTTGCTCAATTTGTCACACTTGGATATAGAGTCTTGTCACCACAATTACCTGGCAATGTACT
CTTTAGAAGACAGACTCGTTGGGAAATTCTGTGGAGAAAATCTCCCTTCATCCATTCTCATTGGCTCCAG
TTCCATCCGGCTGAGGTTCATCTCTGATGCCACAGATTATGCCACTGGGTTTAATCTCACCTATAAAGCA
CTTAAGCCGAGATACCATCCTGATTCCGGCTGCAGGTCTCTAACTATCCTCTTTGAAGAAGGCACTATAC
AGAGTCTTCACTATCCTGAAGACTACAGTAACATGGCTAGCTGTACCTGGATTTTTCAAGCCCCCAACTA
TTGCCTAATTAAGCTGTCATTTCAGAGCCTAGAAATAGAAGAAAATGGAGACTGCTCCTCTGACTATGTG
ACTGTACACAGTGATGTCGAGAAGGAGAAGGAAATAGCTCGGTTCTGCGACTATGTGATACCCAGCCCTG
TGCTGAGTTCCTCCAGTGTGATGCTCATCAGCTTCCAATCAGATGAAAATGGCACTGCCAGGGGCTTCCA
GGCTGACATTTCCTTCATTTCTAGAGCAGATTTAAATATCTCCATATCAGAGGATGAATCAGTGCCTCTG
GAGACATGGGACCTACCACCTGGAGCAATGGAAATTTTCGATGCAGAGAGAGACACACATACAAAACCAC
CATACGAAGAAGACATCGGGGAGATGCCAGCTATTGACAGTGGTCTTCTGAAGCAAGGGGAGAGGCGTGG
AAAGCATTGA

Translation (609 aa):
MPISKDKLILILGMVCLEQGHSETLSSIRNPDCGQSLVKPQPQNYFSLFSRIVGGSQVEKGSYPWQVSLK
QKQKHICGGTIISSQWVITAAHCMANRNIALTLNVTAGEHDLSQAEPGEQTLAIETIIIHPQFSTRKPMI
YDIALLKMAGTFQFGQFVRPVCLPEPGEHFNAGFICTTAGWGRLSEGGRLPQVLQQVNLPILTQEECEAV
LLTLKNPITGKTFLCTGSPDGGRDACQGDSGGSLMCQNRKGAWTLAGVTSWGLGCGRSWRNNARKKEQGS
PGIFTDLRRVLPWILKHIQTGHRRKSTKALCSEPDGLISGSEGELHFPESLHLYYESKQLCVWTFLVPED
MHMLLNLSHLDIESCHHNYLAMYSLEDRLVGKFCGENLPSSILIGSSSIRLRFISDATDYATGFNLTYKA
LKPRYHPDSGCRSLTILFEEGTIQSLHYPEDYSNMASCTWIFQAPNYCLIKLSFQSLEIEENGDCSSDYV
TVHSDVEKEKEIARFCDYVIPSPVLSSSSVMLISFQSDENGTARGFQADISFISRADLNISISEDESVPL
ETWDLPPGAMEIFDAERDTHTKPPYEEDIGEMPAIDSGLLKQGERRGKH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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