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Report for CCDS21612.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21612.1 Public Mus musculus 7 Olfm5 23 108 98 CCDS HistoryNCBI Gene:244180Re-query CCDS DB by CCDS ID:21612.1See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 21612.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000051137.14 ENSMUSP00000052174.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000051137.14Link to Ensembl Protein Viewer:ENSMUSP00000052174.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000051137Re-query CCDS DB by Protein ID:ENSMUSP00000052174
Original member Current member NCBI NM_172905.2 NP_766493.1 Accepted alive Link to Nucleotide Sequence:NM_172905.2Link to Protein Sequence:NP_766493.1Re-query CCDS DB by Nucleotide ID:NM_172905Re-query CCDS DB by Protein ID:NP_766493Link to BLAST:NP_766493.1

Chromosomal Locations for CCDS 21612.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 104153764 104154478 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 104159826 104159985 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 104160352 104160517 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 104160703 104160927 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 104161705 104161857 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 104164734 104164805 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1491 nt):
ATGCAGTCTGACCCAGCTCTTTTGGCCTCCTTTCTACTGCTGCTGCCCCTGGTGCTTCCAGGACAGCCTC
AGCTGGTGAGAAATGTATTAAACTCTATGGATGAGAATGGCACTTTCCAGTGTGTGGTCCATCTACCCAA
CAACTCTATCTTCCTGCAGCAGCTGGATCAGCTACAGAGTACATTACAGGAGCTCATTAGCAAATATGAA
CAAGAACTGTCCAGGGCCAAGGAATATGTACATGTCATTGAGGATCAAGACAGTCAGACTCTAGAACTGA
GTCACATGCTGGAGTCCAGGAATCTGGGTGTCACTGTGTCCCAATATGACAATCCATCCTTCAATCTGCT
ACGCCTGGAGCTAGAAGGAGCACAGGAGCTGGCAGCTCAGCTTAAAGCCAATGGAGGTGTCAGTGGAGCC
ACAGACCTCCTCCATCAACTTCAGAACCAGGTGACCAACGCCAGTCTGACCCTGAAGCTTCTGGTCGACT
CTGCCCGCCAAAGCTTCCATGCCCTCCGAGAGGAAGTGGATATTCTTGAGGGCCAACTAAGTGAGTGTGA
GAGGGAAAAGGAACAGGAACAGTCCTCCAGACACCCTGGTCTACCCCTGGCTCCTGGTTCCTGTGCTCAT
GGAGGCCTGCAGAAAGTGAGCAGACCCCTTGTGGTAAAGCTCAATTGGAGGGGTTTATCATCTAAGGCAG
GTGCCTGGGGTCGTGACTCAGCACCCAGTCCAGCTTCTTCCCTTTACTGGGTGGCTCCTCTGCGTGCTGA
TGGCAGGTACTTTGACTACTATAGGCTGCACAAATCCTATGGTGACCTGGTGCTGCTTAAGCACTATGAG
CAGTGGAAGATGGGCTATGGTGACGGCAGTGGCAATACCGTGTACAAGAACTTCATGTACTTTAACTACT
ATGGCACAAGAGACATGGCCAAGGTGGACCTTTCCTCTAACACCCTAGTGCTGCGACGCCCATTGCCTGG
TGCCACCTACAACAACCGCTTCTCCTATGCTTTTGCGCCTTGGACTGACATAGATTTTACTGGTGATGAG
AAGGGACTGTGGGTGTTATATGCCACAGAGGAGAGCAAAGGCAATCTGGTTGTAAGTCTTCTCAATGATA
GCACCCTAGAAGTTGAGCAAACGTGGTATACCAGCCAGTATAAGCCTGCTCTTTCAGGGGCCTTCATGGT
CTGTGGGGTGCTCTATGCTTTGCGTTCACTAAGCACTCGTCAAGAAGAAATATTTTATGCTTATGACACA
ACCACTGGGCAGGAACACCACCTCAGCATCCTGTTGGACAAGATGCTGGAAACTCTGCACGGCATCAATT
ACTGCCCTTGGGATCACAGGCTCTATGTTTATAATGATGGATTCTTAATAAATTATGACCTCACCTTCCT
GACACTAAAGCAAAAGGTACCGAGCTCTCCCATGAAAAGGTCTTCTGGGGCTCTAGCGCCATCTAAACCT
ATTAAGCTCAACAAGCCATAG

Translation (496 aa):
MQSDPALLASFLLLLPLVLPGQPQLVRNVLNSMDENGTFQCVVHLPNNSIFLQQLDQLQSTLQELISKYE
QELSRAKEYVHVIEDQDSQTLELSHMLESRNLGVTVSQYDNPSFNLLRLELEGAQELAAQLKANGGVSGA
TDLLHQLQNQVTNASLTLKLLVDSARQSFHALREEVDILEGQLSECEREKEQEQSSRHPGLPLAPGSCAH
GGLQKVSRPLVVKLNWRGLSSKAGAWGRDSAPSPASSLYWVAPLRADGRYFDYYRLHKSYGDLVLLKHYE
QWKMGYGDGSGNTVYKNFMYFNYYGTRDMAKVDLSSNTLVLRRPLPGATYNNRFSYAFAPWTDIDFTGDE
KGLWVLYATEESKGNLVVSLLNDSTLEVEQTWYTSQYKPALSGAFMVCGVLYALRSLSTRQEEIFYAYDT
TTGQEHHLSILLDKMLETLHGINYCPWDHRLYVYNDGFLINYDLTFLTLKQKVPSSPMKRSSGALAPSKP
IKLNKP


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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