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Report for CCDS49076.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
49076.1 Public Mus musculus 12 Rpl10l 23 108 98 CCDS HistoryNCBI Gene:238217Re-query CCDS DB by CCDS ID:49076.1Re-query CCDS DB by GeneID:238217See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 49076.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000081908.7 ENSMUSP00000100795.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000081908.7Link to Ensembl Protein Viewer:ENSMUSP00000100795.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000081908Re-query CCDS DB by Protein ID:ENSMUSP00000100795
Original member Current member NCBI NM_001162933.1 NP_001156405.1 Accepted alive Link to Nucleotide Sequence:NM_001162933.1Link to Protein Sequence:NP_001156405.1Re-query CCDS DB by Nucleotide ID:NM_001162933Re-query CCDS DB by Protein ID:NP_001156405Link to BLAST:NP_001156405.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001156405.1 214 P86048 214 100% 0 0

Chromosomal Locations for CCDS 49076.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 12 (NC_000078.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 66283713 66284357 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (645 nt):
ATGGGTCGTCGTCCGGCTCGCTGTTACCGGTACTGTAAGAACAAGCCGTACCCAAAGTCCCGTTTCTGCC
GAGGCGTCCCCGATGCGAAGATCCGCATCTTTGACCTGGGTCGGAAGAAGGCGAAGGTGGATGAGTTTCC
ACTCTGCGGCCACATGGTGTCGGACGAGTATGAGCAGCTCTCCTCGGAAGCCCTGGAGGCCGCACGCATC
TGCGCCAACAAGTACATGGTGAAGAGCTGTGGCAAGGACGGCTTCCACATCCGCGTGCGGCTGCACCCCT
TCCATGTCATCCGCATCAACAAGATGCTGTCGTGCGCAGGTGCCGACAGGCTCCAGACCGGCATGCGAGG
CGCCTTCGGGAAACCACAAGGTACGGTGGCGAGAGTCCACATCGGCCAGGTCATCATGTCCATCCGCACC
AAGCTGCAGAACAAGGAGCACGTGATCGAGGCCCTACGCCGAGCCAAATTCAAGTTCCCCGGCCGCCAGA
AGATCCACATCTCCAAGAAGTGGGGCTTTACCAAGTTCAACGCAGATGAATTTGAAGACAAGGTGGCGGC
CAAGCGCCTCATCCCTGATGGCTGTGGAGTCAAATACATCCCTGAACGAGGTCCTCTGGACAAGTGGCGA
GCCCTGCATTCCTGA

Translation (214 aa):
MGRRPARCYRYCKNKPYPKSRFCRGVPDAKIRIFDLGRKKAKVDEFPLCGHMVSDEYEQLSSEALEAARI
CANKYMVKSCGKDGFHIRVRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVHIGQVIMSIRT
KLQNKEHVIEALRRAKFKFPGRQKIHISKKWGFTKFNADEFEDKVAAKRLIPDGCGVKYIPERGPLDKWR
ALHS


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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