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Report for CCDS50836.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
50836.1 Public Mus musculus 2 Zfp931 23 108 98 CCDS HistoryNCBI Gene:353208Re-query CCDS DB by CCDS ID:50836.1Re-query CCDS DB by GeneID:353208See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 50836.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000108924.8 ENSMUSP00000104552.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000108924.8Link to Ensembl Protein Viewer:ENSMUSP00000104552.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000108924Re-query CCDS DB by Protein ID:ENSMUSP00000104552
Original member Current member NCBI NM_001162922.1 NP_001156394.1 Accepted alive Link to Nucleotide Sequence:NM_001162922.1Link to Protein Sequence:NP_001156394.1Re-query CCDS DB by Nucleotide ID:NM_001162922Re-query CCDS DB by Protein ID:NP_001156394Link to BLAST:NP_001156394.1

Chromosomal Locations for CCDS 50836.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 178067695 178068400 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 178069555 178069615 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 178069823 178069949 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 178078358 178078360 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (897 nt):
ATGGATTTAGTCACCTATGATGACGTGCATGTGAACTTCACTCAGGAAGAGTGGGCTTTGCTGCATCCTT
CTCAGAAGAGTCTCTACAAAGGTGTGATGCTAGAGACCTATAGGAATCTCACAGCTATAGGTTACATTTG
GGAAGAACATACAATTGAAGACCATTTTCAAACTTCTAGACGTCATGGAAGGCATGAAATAAGTTGTTCT
GCAGAGCAACCCTCTGAGTTTATTCAATGTGGTAAAGCCTTTGCATATGAGAGTCATAGTCAAAGGCATG
AAATAAAACATACTGGAGAGAAACACCATGACTGTAACCAATGTGGTAAAGCTTTTAAAAGAAGGCGTGA
CCTCCAAATACATAAGCGAACACATACAGGAGAGAAACCCTATGAATGTAACCAATGTGGAAAAGCCTTT
GCAAGAAGTGGTGACCTCCAAAAACATAAACGAACACATACAGGAGAGAAACCCTACAAATGTAACCAAT
GTGGTAAAGCCTTTGCACAAAGCACTAATCTCCGAATACATAAGCGAACACATACAGGAGAGAAACCCTA
TGAATGTAACCAATGTGGAAAAGCCTTTGCAAGAAGTGATGACCTCCAAAACCATAAACGAACACATACA
GGAGAGAAACCCTACAAATGTAACCAATGTGGTAAAGCCTTTGCAAGAAGCAGTCATCTCCGAATACATA
AGCGAACACATACAGGAGAGAAACCCTATGAATGTAAACATTGTGGTAAAGCCTTTGCAGAAAGCAGTGC
TCTCCAAATACATAAGCGAACACATACAGGAGAGAAACCCTATGAATGTAACCAATGTGGAAAAGCCTTT
GTAAGCAGTGGTGACCTCCGAAAACATAAACGAACACATACAGGAGAGAAACCCTAG

Translation (298 aa):
MDLVTYDDVHVNFTQEEWALLHPSQKSLYKGVMLETYRNLTAIGYIWEEHTIEDHFQTSRRHGRHEISCS
AEQPSEFIQCGKAFAYESHSQRHEIKHTGEKHHDCNQCGKAFKRRRDLQIHKRTHTGEKPYECNQCGKAF
ARSGDLQKHKRTHTGEKPYKCNQCGKAFAQSTNLRIHKRTHTGEKPYECNQCGKAFARSDDLQNHKRTHT
GEKPYKCNQCGKAFARSSHLRIHKRTHTGEKPYECKHCGKAFAESSALQIHKRTHTGEKPYECNQCGKAF
VSSGDLRKHKRTHTGEKP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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