NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS51211.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
51211.1 Public Mus musculus 4 2310002L09Rik 23 108 98 CCDS HistoryNCBI Gene:71886Re-query CCDS DB by CCDS ID:51211.1Re-query CCDS DB by GeneID:71886See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 51211.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000095023.1 ENSMUSP00000092633.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000095023.1Link to Ensembl Protein Viewer:ENSMUSP00000092633.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000095023Re-query CCDS DB by Protein ID:ENSMUSP00000092633
Original member Current member NCBI NM_027981.1 NP_082257.1 Accepted alive Link to Nucleotide Sequence:NM_027981.1Link to Protein Sequence:NP_082257.1Re-query CCDS DB by Nucleotide ID:NM_027981Re-query CCDS DB by Protein ID:NP_082257Link to BLAST:NP_082257.1

Chromosomal Locations for CCDS 51211.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 4 (NC_000070.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 73942708 73943234 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 73950573 73950699 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (654 nt):
ATGGCAAAATGCTTGGTGAAGATCAGGACTCAACGAAGCCTCCATTTGCACATGATGAACCACTGCAGCA
GTAATGTGTTTGTCCGTCTGCTGAAACACGGCTCCAAGGTCATACCTCGAAATGCTGGTGCCCCCTTGTC
TAAAGTGGATGCTTCTGAGCACATGGTTGCAAGCTCACCAGTGAAGGGAGCTCAGAGTGCAGGTTCTCCA
AGGAAAGAGGAAGATAAAGTAAAAGAAGACCCGTTGATCCTCTCTGAACTAGCGTATAACACCAGCGCCA
GCCTGCTCCCTACCCAAGTGGATGATGATGAAGTAGACATGCTATTTGACTGTCCATCTAGGTTTGTGTT
AGAAAGAGAAGACACAGATACGTTTGAGGATGTAGAAGCAGATGAAAATGTCTTTTTGATGGCTGAAGAG
GAGAAGGTGAAGGAAGCTCACCAAGCTTTGTCATGGAGCTATTCCATCCTGACCGGCCGTATCTGGCTCA
ACCCTCTGGTCAAGCGTTGCTCCAGGCTCCTGGTGGTGGGCCTGGGATTGCTTCTGTTTGTATTTCCCCT
TGTACTCCTCCTTTTGGAGTCAGGTATTGATATCTCCTTCTTATTCAAAAACATGAATTTGAGCAATTTT
ACTATGAATACTACCGTCCTCTAA

Translation (217 aa):
MAKCLVKIRTQRSLHLHMMNHCSSNVFVRLLKHGSKVIPRNAGAPLSKVDASEHMVASSPVKGAQSAGSP
RKEEDKVKEDPLILSELAYNTSASLLPTQVDDDEVDMLFDCPSRFVLEREDTDTFEDVEADENVFLMAEE
EKVKEAHQALSWSYSILTGRIWLNPLVKRCSRLLVVGLGLLLFVFPLVLLLLESGIDISFLFKNMNLSNF
TMNTTVL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH