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Report for CCDS20157.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
20157.1 Public Mus musculus 6 Fkbp14 23 108 98 CCDS HistoryNCBI Gene:231997Re-query CCDS DB by CCDS ID:20157.1Re-query CCDS DB by GeneID:231997See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 20157.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000046520.12 ENSMUSP00000046070.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000046520.12Link to Ensembl Protein Viewer:ENSMUSP00000046070.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000046520Re-query CCDS DB by Protein ID:ENSMUSP00000046070
Original member Current member NCBI NM_153573.2 NP_705801.1 Accepted alive Link to Nucleotide Sequence:NM_153573.2Link to Protein Sequence:NP_705801.1Re-query CCDS DB by Nucleotide ID:NM_153573Re-query CCDS DB by Protein ID:NP_705801Link to BLAST:NP_705801.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_705801.1 211 P59024 211 100% 0 0

Chromosomal Locations for CCDS 20157.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 6 (NC_000072.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 54579528 54579686 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 54585803 54585930 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 54589273 54589424 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 54592847 54593043 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (636 nt):
ATGAGGTTTTTCTTGTGGAACGCTATCTTGGCACTGTGGGTCACGGTTCTGAGCGGAGCTCTGATTCCTG
AGCCAGAAGTGAAAATCGAAGTTCTCCAGAAGCCATTCATCTGCCATCGCAAGACCAAGGGAGGGGATCT
GATGTTGGTCCACTACGAAGGCTATTTAGAAAAGGACGGCTCCCTGTTTCATTCCACTCACAAACATAAC
AATGGTCAGCCTGTCTGGTTCACCCTGGGCATACTGGAGGTTCTCAAAGGCTGGGACCAAGGCTTGAAGG
GAATGTGTGTGGGAGAGAAGCGAAAGCTCACCGTTCCTCCTGCCCTGGGCTATGGCAAAGAAGGAAAAGG
TAAAATCCCTCCAGAGAGCACACTGATATTCAACATTGACCTCCTGGAAATTCGAAATGGCCCAAGGTCC
CACGAGTCGTTTCAAGAAATGGACCTCAATGACGACTGGAGACTCTCTAAGCATGAGGTTAAAGTGTATT
TACAGAAGGAGTTTGAGAAGCACGGTGCCGTGGTGAATGAAAGCCATCACGATGCTTTGGTGGAAGATAT
TTTTGATAAAGAAGATGAAGACAAAGATGGATTTATATCTGCCAGAGAATTTACATATGTGCACGACGAA
CTGTAG

Translation (211 aa):
MRFFLWNAILALWVTVLSGALIPEPEVKIEVLQKPFICHRKTKGGDLMLVHYEGYLEKDGSLFHSTHKHN
NGQPVWFTLGILEVLKGWDQGLKGMCVGEKRKLTVPPALGYGKEGKGKIPPESTLIFNIDLLEIRNGPRS
HESFQEMDLNDDWRLSKHEVKVYLQKEFEKHGAVVNESHHDALVEDIFDKEDEDKDGFISAREFTYVHDE
L


Links Key
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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