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Report for CCDS37031.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
37031.1 Public Mus musculus 15 Fyb1 23 108 98 CCDS HistoryNCBI Gene:23880Re-query CCDS DB by CCDS ID:37031.1See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 37031.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000090461.11 ENSMUSP00000087947.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000090461.11Link to Ensembl Protein Viewer:ENSMUSP00000087947.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000090461Re-query CCDS DB by Protein ID:ENSMUSP00000087947
Original member Current member NCBI NM_011815.5 NP_035945.1 Accepted alive Link to Nucleotide Sequence:NM_011815.5Link to Protein Sequence:NP_035945.1Re-query CCDS DB by Nucleotide ID:NM_011815Re-query CCDS DB by Protein ID:NP_035945Link to BLAST:NP_035945.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_035945.1 819 O35601-1 819 100% 0 0

Chromosomal Locations for CCDS 37031.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 15 (NC_000081.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 6579948 6581046 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 6619594 6619750 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 6630072 6630118 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 6632265 6632284 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 6632777 6632811 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 6634796 6634916 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 6638807 6638966 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 6640441 6640585 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 6642557 6642579 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 6643694 6643763 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 6644762 6644899 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 6646637 6646662 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 6648854 6648920 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 6651804 6651903 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 6652382 6652544 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 6658532 6658565 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 6660683 6660714 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 6663150 6663172 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2460 nt):
ATGGCGAAGTTCAACACGGGGAGTAACCCGACAGAGGAGGCCGCCACCAGCAGCAGGCCCTTCAAAGTTG
CAGGACAAAGCTCGCCTTCTGGAATACAATCAAGAAAGAATTTATTTGACAACCAAGGAAATGCCAGCCC
GCCCGCAGGACCCAGCAGCATGCCTAAATTTGGGACCACAAAACCACCCTTGGCAGCGAAACCTACCTAC
GAGGAGAAGCCTGAGAAGGAACCTAAACCCCCGTTTTTAAAACCTACTGGAGGGAGCCCAAGATTTGGAA
CACAGCCAAACTCAGTTTCTAGAGACCCTGAGGTCAAAGTGGGGTTCCTGAAACCTGTAAGCCCCAAACC
CACCAGCTTGACCAAAGAAGATTCCAAACCTGTGGTTTTACGGCCACCTGGGAATAAACTTCACAATTTG
AACCAAGAGTCTGACTTAAAGACGCCAGGACCGAAGCCAGGGCCCGCTCCCCCAGTCCCAGAAAACGAAC
TGAAGCCAGGATTCTCAAAGGTAGCTGGAGCTAAGAGCAAGTTCATGCCAGCGGCACAAGATACTGACTC
CAAACCCCGATTTCCCAGACACACCTTTGGCCAGAAGCCATCCCTAAGCACAGAGGACTCCCAGGAAGAG
AACACTTCTAAGAACGTGCCTGTCCAGAAAGGATCCCCAGTGCAGTTGGGCGCCAAGTCCAAGGGCGCCC
CTTTCAAACCACCTAAGGAAGACCCAGAGGATAAAGACCATGGAGCACCAAGTTCACCCTTTCCTGGAGT
GGTTCTGAAACCTGCTGCGAGCAGAGGGAGCCCGGGTCTCTCCAAAAACTTTGAAGAAAAAAAAGAAGAT
AGGAAAACAGACCTTGCAAAGAACATCTTTCTGAACAAACTGAATCAAGAAGAGCCGGCCAGATTCCCTA
AGGCCCCTTCCAAGCTGACAGCGGGGACACCGTGGGGCCAAAGTCAGGAGAAAGAAGGAGACAAGAATTC
TGCAACCCCGAAGCAGAAGGCCCTGCCACCCCTGTCCGTCTTGGGCCCGCCTCCACCCAAGCCCAACAGA
CCACCCAACGTTGACCTGACCAGATTCCGAAAGGCTGACTCTGCAAACAGTGCCACCAAAAGCCAGACAC
CTTACTCGACAACTTCCCTGCCACCACCTCCGCCTACACATCCAGCCAGCCAGCCACCTCTGCCAGCGTC
TCACCCAGCGCATCCGCCAGTCCCCAGCCTGCCCCCCAGAAACATCAAACCTCCCCTTGACCTGAAACAT
CCTATAAATGACGAAAATCAAGATGGTGTCATGCACTCTGATGGTACTGGAAATCTAGAAGAGGAACAAG
AGAGTGAAGGGGAAACATACGAAGACATAGATTCATCTAAGGAACGAGACAAGAAACGGGAAAAAGAAGA
AAAGAAGAGGTTGGAACTAGAACGAAAGGAGCAGAAGGAGAGAGAGAAGAAAGAGCAAGAACTGAAGAAG
AAATTCAAGCTCACGGGCCCCATTCAAGTCATCCACCATGCAAAAGCCTGCTGCGATGTCAAAGGAGGAA
AGAATGAGCTGAGCTTCAAACAAGGAGAGGACATTGAGATTATCCGCATCACAGACAACCCAGAAGGAAA
ATGGCTGGGCAGGACTGCAAGGGGGTCATATGGTTATATTAAAACAACTGCCGTGGAGATTGACTATGAT
TCGCTGAAACGGAAGAAGAACTCCCTCAATGCTGTCCCACCAAGACTTGTTGAAGATGACCAGGATGTCT
ATGATGATGTGGCTGAGCAGGATGCCCCTAACAGCCACGGTCAGAGCGGAAGTGGAGGGATGTTCCCCCC
GCCACCAACAGACGACGAGATCTATGACGGAATAGAGGAGGAAGATGATGACGATGGATCCGTGCCACAG
GTTGACGAGAAGACTAACGCATGGTCCTGGGGGATTTTGAAGATGTTAAAGGGAAAAGATGACAGAAAGA
AAAGCATTCGAGAGAAACCTAAAGTCTCTGAATCAGACAATAATGAAGGTTCATCTCTCCCTTCTCAGCA
TAAGCAACTGGATGTGGGAGAAGAAGTTTACGATGATGTGGATGCCTCAGACTTCCCTCCTCCACCTGCA
GAGATGAGTCAAGGAATGAGTGTTGGAAGGGCAAAAACGGAAGAGAAAGATCCCAAGAAGCTAAAAAAGC
AAGAAAAGGAAGAAAAAGACCTCAGGAAAAAATTTAAGTACGACGGTGAAATTCGAGTTCTATATTCAAC
TAAAGTTGCGTCCTCCTTAACCTCTAAAAAGTGGGGAGCGAGAGATCTGCAGATAAAACCTGGGGAGTCA
CTCGAAGTTATACAAAGCACAGATGACACCAAAGTTCTCTGCAGGAATGAAGAGGGCAAATATGGTTATG
TCCTTCGGAGTTACCTGGTGGACAATGATGGAGAAATCTATGACGACATCGCTGATGGTTGCATCTATGA
CAATGACTAG

Translation (819 aa):
MAKFNTGSNPTEEAATSSRPFKVAGQSSPSGIQSRKNLFDNQGNASPPAGPSSMPKFGTTKPPLAAKPTY
EEKPEKEPKPPFLKPTGGSPRFGTQPNSVSRDPEVKVGFLKPVSPKPTSLTKEDSKPVVLRPPGNKLHNL
NQESDLKTPGPKPGPAPPVPENELKPGFSKVAGAKSKFMPAAQDTDSKPRFPRHTFGQKPSLSTEDSQEE
NTSKNVPVQKGSPVQLGAKSKGAPFKPPKEDPEDKDHGAPSSPFPGVVLKPAASRGSPGLSKNFEEKKED
RKTDLAKNIFLNKLNQEEPARFPKAPSKLTAGTPWGQSQEKEGDKNSATPKQKALPPLSVLGPPPPKPNR
PPNVDLTRFRKADSANSATKSQTPYSTTSLPPPPPTHPASQPPLPASHPAHPPVPSLPPRNIKPPLDLKH
PINDENQDGVMHSDGTGNLEEEQESEGETYEDIDSSKERDKKREKEEKKRLELERKEQKEREKKEQELKK
KFKLTGPIQVIHHAKACCDVKGGKNELSFKQGEDIEIIRITDNPEGKWLGRTARGSYGYIKTTAVEIDYD
SLKRKKNSLNAVPPRLVEDDQDVYDDVAEQDAPNSHGQSGSGGMFPPPPTDDEIYDGIEEEDDDDGSVPQ
VDEKTNAWSWGILKMLKGKDDRKKSIREKPKVSESDNNEGSSLPSQHKQLDVGEEVYDDVDASDFPPPPA
EMSQGMSVGRAKTEEKDPKKLKKQEKEEKDLRKKFKYDGEIRVLYSTKVASSLTSKKWGARDLQIKPGES
LEVIQSTDDTKVLCRNEEGKYGYVLRSYLVDNDGEIYDDIADGCIYDND


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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