NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS59632.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
59632.1 Public Mus musculus 2 Celf2 23 108 98 CCDS HistoryNCBI Gene:14007Re-query CCDS DB by CCDS ID:59632.1Re-query CCDS DB by GeneID:14007See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 13, NCBI annotation release 103, Ensembl annotation release 72

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 59632.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000183209.7 ENSMUSP00000138355.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000183209.7Link to Ensembl Protein Viewer:ENSMUSP00000138355.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000183209Re-query CCDS DB by Protein ID:ENSMUSP00000138355
Original member NCBI NM_001160292.1 NP_001153764.1 Updated not alive Link to Nucleotide Sequence:NM_001160292.1Link to Protein Sequence:NP_001153764.1Re-query CCDS DB by Nucleotide ID:NM_001160292Re-query CCDS DB by Protein ID:NP_001153764
Current member NCBI NM_001160292.2 NP_001153764.1 Accepted alive Link to Nucleotide Sequence:NM_001160292.2Link to Protein Sequence:NP_001153764.1Re-query CCDS DB by Nucleotide ID:NM_001160292Re-query CCDS DB by Protein ID:NP_001153764Link to BLAST:NP_001153764.1

Chromosomal Locations for CCDS 59632.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 6547086 6547213 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 6553785 6553964 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 6560671 6560790 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 6585974 6586108 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 6600034 6600097 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 6604024 6604182 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 6607882 6607961 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 6615688 6615822 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 6624671 6624719 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 6664115 6664197 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 6721417 6721613 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 6962379 6962414 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 7081107 7081159 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1419 nt):
ATGGTTTCCCTAATCTCTGACCTGGACTCCCTGAGAGGCTGGAAAGCGTTAAGAGAGACTGCCACAGAGT
TATCTGGAAGTCCACCAAGTAACGGCACAGCCAACAAGATGAACGGAGCTTTGGATCATTCAGACCAGCC
AGACCCAGATGCCATTAAGATGTTTGTCGGACAGATCCCTAGGTCCTGGTCGGAAAAGGAGCTGAAAGAA
CTTTTTGAGCCTTATGGAGCTGTCTACCAGATCAACGTCCTCCGGGACCGGAGTCAGAACCCTCCCCAGA
GTAAAGGTTGTTGTTTCGTAACATTTTATACAAGAAAAGCTGCACTTGAGGCCCAGAATGCACTGCACAA
TATTAAAACTTTACCTGGGATGCATCATCCCATTCAGATGAAACCTGCAGATAGTGAAAAGTCAAACGCT
GTGGAAGACAGAAAATTGTTCATAGGAATGGTTTCCAAGAAATGTAACGAGAATGATATCAGAGTGATGT
TTTCTCCATTCGGTCAGATAGAAGAATGCCGGATTCTCCGGGGACCTGATGGGCTGAGTCGAGGCTGTGC
GTTTGTCACATTTTCTACAAGGGCAATGGCACAGAATGCAATCAAAGCCATGCATCAGTCTCAGACCATG
GAGGGCTGCTCTTCACCAATCGTGGTGAAGTTTGCTGACACTCAGAAGGACAAAGAGCAAAGGCGCCTCC
AGCAGCAGCTTGCACAGCAGATGCAACAGCTCAACACTGCCACTTGGGGGAACCTAACAGGACTGGGTGG
ACTTACCCCGCAGTACCTGGCGCTTCTGCAGCAGGCCACCTCCTCCAGCAACCTGGGTGCATTCAGTGGC
ATTCAGCAAATGGCTGGCATGAATGCTTTACAGTTACAGAATCTGGCAACACTGGCTGCTGCTGCAGCTG
CTGCTCAAACCTCAGCCACCAGCACCAATGCAAACCCTCTGTCTAGCACAAGCAGTGCCCTGGGAGCCCT
CACAAGCCCTGTGGCTGCTTCAACCCCCAATTCCACCGCTGGTGCGGCCATGAATTCCTTGACCTCTCTT
GGGACTCTACAAGGATTGGCTGGAGCCACTGTCGGATTGAATAATATTAATGCACTAGCAGGTATGGCGG
CTCTGAATGGAGGACTTGGCGCCACAGGCTTGACGAATGGTACGGCTGGCACCATGGACGCCCTGACCCA
GGCCTACTCAGGAATTCAGCAGTATGCGGCAGCTGCACTGCCCACTTTGTACAGCCAGAGCTTGCTGCAA
CAGCAGAGTGCTGCAGGCAGCCAGAAGGAAGGTTTTGTTAGCTATGACAATCCAGTCTCTGCACAAGCTG
CAATCCAGGCTATGAACGGCTTTCAGATCGGCATGAAACGCTTGAAGGTGCAGCTGAAACGCTCCAAAAA
CGACAGCAAACCTTACTGA

Translation (472 aa):
MVSLISDLDSLRGWKALRETATELSGSPPSNGTANKMNGALDHSDQPDPDAIKMFVGQIPRSWSEKELKE
LFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNA
VEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTM
EGCSSPIVVKFADTQKDKEQRRLQQQLAQQMQQLNTATWGNLTGLGGLTPQYLALLQQATSSSNLGAFSG
IQQMAGMNALQLQNLATLAAAAAAAQTSATSTNANPLSSTSSALGALTSPVAASTPNSTAGAAMNSLTSL
GTLQGLAGATVGLNNINALAGMAALNGGLGATGLTNGTAGTMDALTQAYSGIQQYAAAALPTLYSQSLLQ
QQSAAGSQKEGFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH