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Report for CCDS26914.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
26914.1 Public Mus musculus 14 Eaf1 23 108 98 CCDS HistoryNCBI Gene:74427Re-query CCDS DB by CCDS ID:26914.1Re-query CCDS DB by GeneID:74427See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 26914.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000022446.6 ENSMUSP00000022446.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000022446.6Link to Ensembl Protein Viewer:ENSMUSP00000022446.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000022446Re-query CCDS DB by Protein ID:ENSMUSP00000022446
Original member Current member NCBI NM_028932.4 NP_083208.1 Accepted alive Link to Nucleotide Sequence:NM_028932.4Link to Protein Sequence:NP_083208.1Re-query CCDS DB by Nucleotide ID:NM_028932Re-query CCDS DB by Protein ID:NP_083208Link to BLAST:NP_083208.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_083208.1 268 Q9D4C5 268 100% 0 0

Chromosomal Locations for CCDS 26914.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 14 (NC_000080.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 31495269 31495371 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 31497709 31497803 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 31500120 31500256 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 31502263 31502453 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 31504287 31504520 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 31506571 31506617 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (807 nt):
ATGAACGGCACGGCGAACCCGCTGCTGGACCGGGAGGAACACTGTCTGCGGCTAGGGGAAAGCTTCGAGA
AGCGGCCGCGGGCCTCCTTCCACACGATTCGCTACGATTTTAAGCCAGCATCAATAGACACTTCCTGTGA
AGGAGAACTCCAGGTTGGCAAAGGAGATGAAGTCACCATTACGCTGCCACACATCCCTGGGTCCACGCCG
CCAATGACGGTGTTCAAAGGGAACAAGCGGCCCTATCAGAAAGACTGTGTGCTCATTATTAACCACGACA
CTGGAGAGTATGTGCTGGAGAAGCTGAGCAGCAGCATTCAGGTCAAGAAGACAAGAGCTGAGGGAAGCAG
TAAAATCCAAGCTCGAATGGAGCAGCAGCCCGCTCGTCCCCCACAGCCGTCACAGCCACCCCCTCCACCT
CCACCCATGCCGTTCCGAGCCCCAACGAAGCCTCCAGCTGGACCCAAAACTTCTCCCCTGAAGGATAACC
CCTCACCTGAGCCCCAGTTGGATGACATCAAAAGAGAGCTGAGGGCCGAGGTGGACATTATTGAGCAGAT
GAGCAGCAGCAGTGGGAGCAGCTCCTCCGACTCTGAGAGCTCCTCGGGAAGTGACGACGACAGCTCCAGC
AGCGCAGGCGAAGACAATGGCCCAGCCTCGCCTCCCCAGCCCTCACACCAGCAGCCCTACAACAGCAGGC
CTGCGGTGGCCAATGGAACCAGCCGGCCCCAAGGAAGCTCTCAGCTCATGAACACGCTCAGAAATGACCT
GCAGCTAAGTGAGTCTGGCAGTGACAGTGATGACTAG

Translation (268 aa):
MNGTANPLLDREEHCLRLGESFEKRPRASFHTIRYDFKPASIDTSCEGELQVGKGDEVTITLPHIPGSTP
PMTVFKGNKRPYQKDCVLIINHDTGEYVLEKLSSSIQVKKTRAEGSSKIQARMEQQPARPPQPSQPPPPP
PPMPFRAPTKPPAGPKTSPLKDNPSPEPQLDDIKRELRAEVDIIEQMSSSSGSSSSDSESSSGSDDDSSS
SAGEDNGPASPPQPSHQQPYNSRPAVANGTSRPQGSSQLMNTLRNDLQLSESGSDSDD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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