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Report for CCDS53941.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
53941.1 Public Homo sapiens 15 EID1 24 110 108 CCDS HistoryNCBI Gene:23741Re-query CCDS DB by CCDS ID:53941.1See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 53941.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000530028.3 ENSP00000431162.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000530028.3Link to Ensembl Protein Viewer:ENSP00000431162.2Re-query CCDS DB by Nucleotide ID:ENST00000530028Re-query CCDS DB by Protein ID:ENSP00000431162
Original member Current member NCBI NM_014335.3 NP_055150.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_014335.3Link to Protein Sequence:NP_055150.1Re-query CCDS DB by Nucleotide ID:NM_014335Re-query CCDS DB by Protein ID:NP_055150Link to BLAST:NP_055150.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_055150.1 187 Q9Y6B2-1 187 100% 0 0

Chromosomal Locations for CCDS 53941.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 48878177 48878740 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (564 nt):
ATGTCGGAAATGGCTGAGTTGTCCGAGCTGTATGAAGAGAGCAGTGACCTGCAGATGGATGTGATGCCTG
GCGAGGGTGACCTTCCGCAGATGGAGGTAGGCAGCGGGAGCCGGGAGCTATCCCTGCGTCCCTCCCGCAG
CGGGGCCCAACAGCTCGAGGAGGAAGGCCCAATGGAGGAGGAGGAGGCCCAGCCAATGGCGGCGCCAGAG
GGGAAACGGAGCCTTGCTAACGGGCCCAACGCTGGGGAGCAGCCAGGCCAGGTGGCGGGCGCAGACTTCG
AGAGCGAGGACGAGGGCGAGGAATTTGATGACTGGGAGGACGACTACGACTATCCCGAAGAGGAGCAGCT
CAGTGGTGCCGGCTACAGAGTATCAGCCGCTCTTGAAGAAGCCGACAAGATGTTTCTGAGAACAAGAGAA
CCAGCCCTGGATGGCGGGTTTCAGATGCATTATGAGAAGACCCCGTTTGATCAGTTAGCTTTTATCGAAG
AGCTTTTTTCACTGATGGTTGTCAATCGTCTGACCGAAGAACTCGGCTGTGATGAGATTATTGATAGAGA
GTAG

Translation (187 aa):
MSEMAELSELYEESSDLQMDVMPGEGDLPQMEVGSGSRELSLRPSRSGAQQLEEEGPMEEEEAQPMAAPE
GKRSLANGPNAGEQPGQVAGADFESEDEGEEFDDWEDDYDYPEEEQLSGAGYRVSAALEEADKMFLRTRE
PALDGGFQMHYEKTPFDQLAFIEELFSLMVVNRLTEELGCDEIIDRE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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