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Report for CCDS35098.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
35098.2 Public Homo sapiens 9 FRRS1L 24 110 108 CCDS HistoryNCBI Gene:23732Re-query CCDS DB by CCDS ID:35098.2See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 35098.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000561981.5 ENSP00000477141.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000561981.5Link to Ensembl Protein Viewer:ENSP00000477141.2Re-query CCDS DB by Nucleotide ID:ENST00000561981Re-query CCDS DB by Protein ID:ENSP00000477141
Original member Current member NCBI NM_014334.4 NP_055149.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_014334.4Link to Protein Sequence:NP_055149.3Re-query CCDS DB by Nucleotide ID:NM_014334Re-query CCDS DB by Protein ID:NP_055149Link to BLAST:NP_055149.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_055149.3 293 Q9P0K9 293 100% 0 0

Chromosomal Locations for CCDS 35098.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 109137455 109137627 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 109141343 109141589 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 109147051 109147189 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 109149636 109149720 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 109166901 109167138 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (882 nt):
ATGGCGCGGCCGCCCCGGCAGCACCCGGGGGTCTGGGCGTCGCTGCTCCTGCTGCTACTGACGGGGCCCG
CCGCCTGCGCAGCCAGCCCCGCGGACGACGGTGCGGGCCCGGGGGGCCGGGGACCCCGGGGACGCGCGCG
GGGGGACACGGGCGCCGACGAGGCGGTGCCGCGCCACGACTCCTCCTACGGCACCTTCGCGGGGGAGTTC
TACGACCTGCGCTACCTGTCGGAGGAGGGTTACCCCTTCCCTACTGCTCCTCCTGTGGATCCATTTGCCA
AAATCAAAGTGGACGACTGTGGAAAAACTAAGGGATGCTTTAGATATGGCAAACCAGGCTGTAATGCAGA
GACCTGTGACTATTTCCTCAGCTACCGGATGATAGGGGCTGATGTAGAATTTGAGCTGAGTGCAGACACA
GATGGTTGGGTAGCAGTTGGATTCTCTTCAGACAAGAAAATGGGTGGTGATGATGTCATGGCCTGCGTCC
ATGATGACAATGGCAGGGTCCGCATACAGCACTTCTATAATGTAGGCCAGTGGGCAAAGGAGATTCAGAG
AAACCCTGCCAGAGATGAAGAAGGAGTTTTTGAGAACAATCGCGTCACCTGCAGATTTAAACGCCCTGTG
AATGTTCCCAGAGATGAAACAATTGTTGATCTGCATTTGAGTTGGTATTATCTGTTTGCTTGGGGTCCAG
CCATTCAGGGCTCTATCACTCGACATGATATAGACTCACCGCCGGCTTCAGAGCGTGTTGTCAGTATTTA
CAAGTATGAAGACATTTTTATGCCATCAGCTGCCTATCAAACCTTCTCATCTCCATTTTGTTTGCTTCTG
ATTGTTGCTCTGACCTTCTACCTATTGATGGGAACCCCCTAA

Translation (293 aa):
MARPPRQHPGVWASLLLLLLTGPAACAASPADDGAGPGGRGPRGRARGDTGADEAVPRHDSSYGTFAGEF
YDLRYLSEEGYPFPTAPPVDPFAKIKVDDCGKTKGCFRYGKPGCNAETCDYFLSYRMIGADVEFELSADT
DGWVAVGFSSDKKMGGDDVMACVHDDNGRVRIQHFYNVGQWAKEIQRNPARDEEGVFENNRVTCRFKRPV
NVPRDETIVDLHLSWYYLFAWGPAIQGSITRHDIDSPPASERVVSIYKYEDIFMPSAAYQTFSSPFCLLL
IVALTFYLLMGTP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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