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Report for CCDS8705.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
8705.1 Public Homo sapiens 12 RASSF8 24 110 108 CCDS HistoryNCBI Gene:11228Re-query CCDS DB by CCDS ID:8705.1Re-query CCDS DB by GeneID:11228See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 8705.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000381352.7 ENSP00000370756.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000381352.7Link to Ensembl Protein Viewer:ENSP00000370756.3Re-query CCDS DB by Nucleotide ID:ENST00000381352Re-query CCDS DB by Protein ID:ENSP00000370756
Original member Current member EBI ENST00000615708.4 ENSP00000481417.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000615708.4Link to Ensembl Protein Viewer:ENSP00000481417.1Re-query CCDS DB by Nucleotide ID:ENST00000615708Re-query CCDS DB by Protein ID:ENSP00000481417
Original member Current member NCBI NM_007211.5 NP_009142.2 Accepted alive Link to Nucleotide Sequence:NM_007211.5Link to Protein Sequence:NP_009142.2Re-query CCDS DB by Nucleotide ID:NM_007211Re-query CCDS DB by Protein ID:NP_009142Link to BLAST:NP_009142.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_009142.2 392 Q8NHQ8-2 392 100% 0 0

Chromosomal Locations for CCDS 8705.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 26055344 26055446 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 26064498 26065387 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 26067569 26067713 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 26079033 26079073 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1179 nt):
ATGGAACTTAAAGTATGGGTGGATGGAGTTCAGAGGATTGTTTGTGGAGTCACTGAAGTCACAACTTGCC
AGGAGGTTGTCATAGCCTTAGCTCAAGCAATAGGTCGAACTGGAAGGTACACCCTTATAGAGAAATGGAG
AGATACTGAAAGACACTTAGCACCTCATGAAAATCCTATCATATCCTTAAACAAATGGGGGCAGTATGCT
AGTGATGTGCAGCTCATTCTACGACGAACTGGGCCGTCTCTCAGTGAGCGACCCACTTCAGACAGTGTGG
CTCGAATTCCTGAAAGAACTTTATACAGGCAGAGTCTGCCCCCCTTAGCTAAACTGAGGCCTCAGATTGA
CAAATCAATCAAAAGGAGGGAACCGAAAAGGAAATCACTGACATTTACAGGAGGTGCCAAAGGATTAATG
GACATTTTTGGAAAAGGTAAAGAAACTGAGTTTAAGCAAAAGGTGCTGAATAACTGCAAAACAACAGCAG
ATGAGTTGAAGAAGCTAATCCGTCTGCAGACAGAGAAGCTTCAATCCATTGAGAAACAGCTGGAATCTAA
TGAAATAGAAATAAGATTTTGGGAGCAAAAGTATAATTCCAACCTTGAAGAGGAAATTGTCCGTCTAGAG
CAAAAGATCAAAAGAAACGATGTAGAAATTGAGGAGGAAGAATTCTGGGAAAATGAATTACAGATTGAAC
AGGAAAATGAAAAACAGCTGAAGGATCAACTTCAAGAAATAAGACAGAAAATAACAGAATGTGAAAACAA
ATTAAAGGACTATTTGGCACAGATCCGGACTATGGAAAGTGGTCTTGAAGCAGAAAAATTGCAACGGGAA
GTTCAAGAGGCACAGGTCAATGAGGAAGAGGTTAAAGGAAAGATCGGTAAGGTCAAAGGGGAGATTGACA
TTCAAGGCCAGCAGAGTCTGAGGTTGGAAAATGGCATCAAAGCTGTGGAAAGATCTCTTGGACAAGCCAC
CAAACGCTTACAGGACAAAGAACAGGAACTGGAGCAGTTGACTAAGGAGTTGCGGCAAGTCAATCTCCAG
CAGTTCATCCAGCAGACAGGGACAAAAGTTACCGTTTTGCCAGCGGAGCCCATTGAAATAGAGGCCTCAC
ATGCAGACATTGAAAGGGGGATCATCATTCTTTCTGATAAGCAGGAGTGTAAAGATTAG

Translation (392 aa):
MELKVWVDGVQRIVCGVTEVTTCQEVVIALAQAIGRTGRYTLIEKWRDTERHLAPHENPIISLNKWGQYA
SDVQLILRRTGPSLSERPTSDSVARIPERTLYRQSLPPLAKLRPQIDKSIKRREPKRKSLTFTGGAKGLM
DIFGKGKETEFKQKVLNNCKTTADELKKLIRLQTEKLQSIEKQLESNEIEIRFWEQKYNSNLEEEIVRLE
QKIKRNDVEIEEEEFWENELQIEQENEKQLKDQLQEIRQKITECENKLKDYLAQIRTMESGLEAEKLQRE
VQEAQVNEEEVKGKIGKVKGEIDIQGQQSLRLENGIKAVERSLGQATKRLQDKEQELEQLTKELRQVNLQ
QFIQQTGTKVTVLPAEPIEIEASHADIERGIIILSDKQECKD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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