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Genome Displays Related Resources Gene HomoloGene MANE RefSeq
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Report for CCDS40122.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
40122.1 |
Public |
Mus musculus |
7 |
Gtf3c1 |
23 |
108 |
98 |
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Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47
Review status: Provisional (this record has not been manually reviewed by the collaboration) Sequence IDs included in CCDS 40122.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
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EBI |
ENSMUST00000055506.8 |
ENSMUSP00000056719.7 |
Accepted |
alive |
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NCBI |
NM_207239.1 |
NP_997122.1 |
Accepted |
alive |
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RefSeq |
Length |
Related UniProtKB/SwissProt |
Length |
Identity |
Gaps |
Mismatches |
NP_997122.1 |
2101 |
Q8K284-1 |
2101 |
100% |
0 |
0 |
Chromosomal Locations for CCDS 40122.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (6306 nt): ATGGACGCGCTCGAGTCGTTGTTGGACGAGGTGGCCCTGGAGGGGCTCGACGGCCTGTGCCTGCCCGCGC TGTGGAGCCGCCTGGAATCCCGCTCGCCTGCCTTCCCATTGCCTCTGGAACCCTACACGCAGGAGTTTTT GTGGCGGGCTTTAGCCACGCACCCGGGCATCAGTTTCTACGAGGAGCCGCGAGAGAGACCTGACCTGCAG CTCCAAGACCGGTATGAAGAAATCGACTTGGAAACTGGGATTTTGGAGTCGAGGAGGGACCCGGTCACTC TGGAGGATGTCTACCCCATTCACATGATCTTAGAGAACAAGGATGGCATCCAGGGCTCCTGCCGATACTT TAAGGAGAGAAAGGACATCACCAGTAGCATCAGGAGCAAGTGTTTGCAGCCTCGATGTACAATGGTAGAA GCCTTCAGCAGGTGGGGTAAGAAGCTCATCATTGTGGCTTCCCAGGACATGCGGTACCGGGCCTTGATAG GCCTAGAGGGGGACCCTGATCTGAAGCTTCCCGATTTCTCCTACTGCATTCTGGAGCGCTTAGGTCGATC CAGGTGGCAAGGAGAGCTGCAGCGAGACCTTCACACCACCGCTTTCAAGGTTGACGCTGGGAAGCTTCAT TATCACAGGAAAATTTTGAACAAGAATGGGCTCATTACAATGCAGTCACATGTGATCCGATTACCTACTG GAGCCCAGCAACACTCCATCCTCCTACTCCTTAACCGGTTTCATGTGGACAGGAGGAGCAAGTATGACAT CCTCATGGAAAAGCTGTCTATGATGCTGAGCACACGGAGCAACCAGATTGAGACTCTGGGCAAGCTGAGG GAGGAACTGGGGCTGTGTGAAAGGACATTCAAGCGTCTGTACCAGTACATGCTGAATGCTGGGCTGGCCA AGGTGGTGTCCCTTCCCTTGCAGGAGATTCACCCTGAGTGTGGTCCCTGTAAGACCAAGAAAGGAACTGA TGTCATGGTGCGCTGTCTTAAGCTCCTGAAGGAATTCAAGCGAAAGATGGAAGACGACCACGATGATGAT GACGATGAGGAGGTCATCTCCAAGGGAGTCCCTCCTGTGGACATCGTCTTTGAGCGGGACATGCTCACGC AGACCTACGAGCTCATTGAGCGCAGAGGAACGAAAGGAATTTCCCAAGCTGAGATCCGAGTTGCTATGAA CGTGGGAAAGCTGGAAGCAAGAATGCTGTGTCGGCTCCTTCAGAGGTTCAAGGTTGTCAAGGGGTTCATG GAAGATGAAGGCCGGCAGCGGACCACCAAGTACATTTCCTGTGTGTTTGCGGAGGAGAGTGACTTGAGCC GACAATATGCTCGTGAAAAGGCCCGAGGAGAGCTACTAACCACTGTGAGCCTCGCCTCAGTGCAAGATGA GTCCCTCATGCCTGAGGGCGAAGAGGCCTTCCTCTCTGACTCAGAAAGTGAGGAAGAGAGCAGCTGCAGT GGTGGCAAGCGGAGGGGCCGAGGGTCCCGGGGCCATGCAAGAGCCTCAGGGGATGCTGGGTCTGGCTCTC GGCCTCATCACTCCACTCCAGCCAAGGGCGGGTGGAAAGTCCTAAATCTGCACCCACTGAAGAAGCCGAA AGCTGCCGCTGAGGAGAGGTCCCGCAGAAGCTCCGCTTGTAGGGATGGCCTGGACACCAGCAGCTCGTCT GAGCTCAATGCCCCCTTCGACCCTCACAGCATGGACAGTCACAGTGGTGACATCGCTGTGATTGAGGAGG TCCGGCTCGATAACCCCAAGGAGGGTGGTGGCTCCCAGAAAGGCGGACGGCATGGCTCAAGCCAGGACAA GCCTCACAAAACATACCGACTGCTAAAGCGCAGAAATCTCATCATAGAAGCTGTCACCAACCTCCGCCTG ATTGAGAGCCTGTTCACGATTCAGAAGATGATCATGGACCAGGAGAAGCAAGAGGGTGTCTCCACCAAAT GCTGTAAGAAGTCCATTATCCGCTTGGTGCGGAACCTGTCTGAGGAGGGTCTCTTGCGATTGTATCGGAC TACAGTCATTCAGGATGGCATCAAGAAGAAGGTAGATCTGGTCGTGCACCCATCTATGGACCAGAATGAT CCTCTTGTGAGAAGTGCTATTGAGCAGGTTCGCTTCCGGATCTCCAACTCAAGCACAGCAAACAGAGTTA AAGTTCCACCGGCCCCAGCGCCCCAAGAAGAAGCAGAAGAGGAAAACCAAGAACCAGAAGTCCCAAGTCG ATCAGCAAACTCTGACCCAAACACATCCTCGAAGCCAGAAAGCACTCGGGTGAAAAAGACTGACGAGAAA ATGGGCATAACCCCACTCAAAAATTATAAACCTGTCATAGTTCCTGGACTCGGGCGCTCCATAGGCTTCC TTCCCAAGATGCCCCGCCTAAAGGCGATGCACCTGTTCCTGTGGTACCTGGTGTATGGGCATCCTGCCGG CCACACTGGGGAGCAGCCTGCTCTCCACAGTGAGAGGAAAACGGGCAAGCAGGAGTCCAGCAGACCAGGG GCTCAGCCCTCCTCAGGAGATGACTGGGACACCTCTGAAGCCAAAAACAACACAGAAAGCAGCTCCTGGG AGTCAGAAATGGAACTCTCCACAGAGATAGTGTATGTGGATGAGATCTCATGGATGCGCTACGTCCCTCC CATCCCGATCCACAGAGACTTTGGCTTTGGCTGGGCTCTTGTCAGTGACATTCTTCTCTGCCTGCCCCTC TCCATCTTTGTCCAACTTGTTCAAGTCAGCTACAAGGTGGATAACCTGGAGGATTTTCTGAATGACCCGC TGAAGAAGCACACACTGATCCGCTTCCTCCCCAGGCACATCCGGCAGCAGCTACTGTATAAGAGGCGGTA TATTTTCTCGGTGGTGGAGAACCTGCAGCGGCTGTGTTACATGGGGCTGCTACAGTTTGGACCCACAGAG AAGTTTCAGGATAAAGACCAGGTCTTTGTTTTCCTGAAGAAGAATGCAGTCATTGTGGACACCACCATCT GTGACCCACATTACAACCTGGCCCACAGCAGCCGGCCTTTTGAGAGACGTCTCTACGTCCTGGATTCCAT GCAGGATGTGGAATGCTACTGGTTTGACCTGCAGTGTATCTGCCTAAACACCCCACTAGGTGTGGTGCGT TGCCCGTGTGCACAGAAGATCTGCCCTGATCCAGGCAGTGACCCAGAAGGCAGCTTGCGGAAGGAGCAGG AGAGTGCCATGGACAAGCACAACCTAGAGCGCAAGTGTGCCATGCTGGAGTATACCACGGGGAGCCGAGA AGTTGTGGATGAAGGCTTAGTCCCAGGGGATGGGCTGGGAGCTGCTGGGCTGGACTCCAGCTTCTATGCA CACTTGAAGCGCAACTGGGTCTGGACCAGCTACATCATCAACAAAGCCAGAAAGAACAACACCTCCGAAA ATGGGCTCACAGGAAGACTCCAGACCTTCCTGTCTAAGCGCCCAATGCCCCTTGGGTCCGGAGGCAGTGG CCGTTTGCCTCTCTGGTCAGAGGGGAGAGCTGATGCTGAGCTCTGTGCTGACAAGGAAGAACAATTTGAA CTGGACAGAGAACCTACCCCTGGCAGGAACCGGAAAGTGCGTGGTGGGAAGAGCCAGAAGCGGAAGCGGC TGAAGAAGGAGCCTATAAGGAAGACCAAGCGAAGAAGAAGAGGAGAGCATCCAGAAGCCAAAAGCAAAAA GCTACGCTACCAAGATGAGGCTGACCAGAACGCCCTCCGGATGATGACCCGGCTGCGTGTCTCTTGGTCC ATGCAGGAGGATGGGCTGCTAATGCTCTGCCGGATCGCCAGCAACGTCCTCAACACCAAGGTGAAAGGAC CATTTGTCACCTGGCAGGTCGTGCGGGACATTTTGCATGCTACCTTTGAAGAGTCTTTGGATAAAACCTC TCACTCGGTTGGACGAAGAGCTCGCTACATAGTCAAAAATCCCCAGGCTTTCATGAACTACAAGGTCTGT CTGGCAGAAGTGTACCAAGATAAGGCACTTGTTGGAGATTTCATGAGTCGGAAGGGTAACTACGAAGACC CAAAGGTTTGTGCCAAGGAGTTTAAAGAATTTGTAGAGAAACTGAAAGAGAAGTTCAGCTCTGGCCTGAG GAACCCCAATCTCGAGATCCCCAACACACTGCAGGAACTCTTTGCCAAGTACCGAGTGTTGGCGATCGGG GATGAGAAGGACCGAGTCAGGAAGGAGGATGAGCTGAATAGTGTGGAGGACATCCACTTCCTGGTGCTAC AGAACCTGATCCAGAGCACACTGTCCCTCTCTAACAGCCAGTCCAACTCTTGCCAGTCCTTCCAGATCTT CCGCCTCTACCGGGAGTTCCGGGAGCCCGTGCTGGTGCGGGCCTTCATGGAGTGCCAAAAGAGGAGCCTG GTCAACCGACGCCGTGTCAGCCACTCCCAGGGCCCCAAGAAGAACCGTGCCGTGCCCTTTGTGCCCATGT CCTACCAGCTCTCCCAGTCATACTACAAGCTTTTCACCTGGCGATTTCCCACCACCATCTGCACTGAATC CTTCCAGTTCTACGACAGACTGCGGACCAACGGCATGCTAGACCAGCCTGATCATTTTTCTTTCAAGGAC CTGGATAGCAGTGACCCTTCAAATGACCTGGTGGCATTTTCTTTGGACAGCCCTGGAGGACACTGTGTAA CAGCCCTGGCCCTCTTCTCTTTGGGGCTCCTCTCTGTGGATGTCAGAATCCCAGAGCAGATCGTGGTGGT GGACAGCTCCATGGTGGAGAGTGAGGTCATGAAGAGCTTGGGGAAAGATGGTGGCTTGGATGATGACGAG GAAGAGGAAGACCTGGATGAAGGTTCAGGGACCAAGCGCCAGGGTGTGGAAGTAAAGGCCCATCAGGCCT CACACACCAAGTACCTGCTGATGAGAGGTTACTACACAGTGCCTGGCATGGTCAGCACACGCAACCTGAA CCCCAATGACAGCATCGTGGTCAACTCCTGCCAGGTTAAATTCCGACTGCGCAACACCCCTGCATCCACC CAGCTTGGGCCCACTGGGTTCACAGCCACACCACTGGAAGAGCTCCAGGCTGGTCTTTCCTGCCTCCCTG CCTCCTTTACCAGCCTGGTGGATCCACAGCTGCGTACCCACTGCCCAGAAGAGTTTGCCCACCAGATGGC ACAGTCAGGGTATAGTCCTGAGGATGTGGCTGCCTCCCTAGAGATCCTGCAGGCTGTAGCAGCTGCTGAC TGCTTCGGGATTGACAAGGAGAAGCTGAGCAGGCAGTTCTCCGCCTTGGAGAAGATAGCGGACAGGCGCA CCAGGACGTTCCTGGACTACATCCAGGACCTCTTGGAACAGGAACAAGTCATGGAAGTTGGAGGTAACAC TGTGCGCCTAGTGACCATGGCCTCTGCACAGCCCTGGCTTCTGCATTCAATGCGTCTGAGAGACATGGAA GTAGACACTAAGGCCTCAGGGGATGACAGCCAATCCAGACTCCCTGAGGGGCCTTCCATCGAAGACCACA CCTCTGAGGGAGCAGCGGTGCCTCCAGTCAGCTCCCATAGCACTAAAAAGCGTCCCCACTGCCCTGAGAC TGATGCTGAGGAAGCCACAAGGCTCCCTGCCAAGAAGCCCACACTACAGGATGTCCGTGTGGCTGCCAGC CCTAGGCCTGGAGCGGAAGAGCAGGCAGAGGCCCAGGCCCCAGCTCAGCTTGCAGCTCCTGAAGATGCAG ATGCAGGGGGCCCCAGACAGGAGAACCAAGAGAATGTTGGTGTCTCAGGCCTAGAGCAGCTGGGCTGTGA GTTCCAGCTTCCAGAAGGCTCTGAAGACCCCAGAGGCCTTACAGAGAGTAACATGGCCCAGGCAGCGTGG GAGAGTGGCTGTGAGAGAGTGTGTTTCGTCGGCCGCCCATGGCGAGGTGTGGATGGGCACCTGAACATGC CCGTGTGCAAAGGCATGCTGGAGGCTGTGCTCTACCACATCATGTCAAGGCCCGGCGTTCCCGAGAGCTG CCTGCTGCAGTACTACCAGGGCGTCCTGCAGCCTGTTGCTGTCCTTGAGCTGCTCCGGGGCCTGGAGTCC CTCGGCTGTATCCAGAAGCGGACTCTGAGGAAGCCAGCGAGTGTCTCGCTCTTCTCCAGGCCTGTGGTGG AGGGCCTGGGTCAGGCCAGTGAGGCTGAGGCGCTCTCCTGCCACGAGAGCACTGTCACCTTCTATGAGCC CACGCTGGACTGTACCATCCGTCTGGGCCGTGTCTTCCCCCATGATATCAACTGGAACAAGTGGATCCAT TTATAG
Translation (2101 aa): MDALESLLDEVALEGLDGLCLPALWSRLESRSPAFPLPLEPYTQEFLWRALATHPGISFYEEPRERPDLQ LQDRYEEIDLETGILESRRDPVTLEDVYPIHMILENKDGIQGSCRYFKERKDITSSIRSKCLQPRCTMVE AFSRWGKKLIIVASQDMRYRALIGLEGDPDLKLPDFSYCILERLGRSRWQGELQRDLHTTAFKVDAGKLH YHRKILNKNGLITMQSHVIRLPTGAQQHSILLLLNRFHVDRRSKYDILMEKLSMMLSTRSNQIETLGKLR EELGLCERTFKRLYQYMLNAGLAKVVSLPLQEIHPECGPCKTKKGTDVMVRCLKLLKEFKRKMEDDHDDD DDEEVISKGVPPVDIVFERDMLTQTYELIERRGTKGISQAEIRVAMNVGKLEARMLCRLLQRFKVVKGFM EDEGRQRTTKYISCVFAEESDLSRQYAREKARGELLTTVSLASVQDESLMPEGEEAFLSDSESEEESSCS GGKRRGRGSRGHARASGDAGSGSRPHHSTPAKGGWKVLNLHPLKKPKAAAEERSRRSSACRDGLDTSSSS ELNAPFDPHSMDSHSGDIAVIEEVRLDNPKEGGGSQKGGRHGSSQDKPHKTYRLLKRRNLIIEAVTNLRL IESLFTIQKMIMDQEKQEGVSTKCCKKSIIRLVRNLSEEGLLRLYRTTVIQDGIKKKVDLVVHPSMDQND PLVRSAIEQVRFRISNSSTANRVKVPPAPAPQEEAEEENQEPEVPSRSANSDPNTSSKPESTRVKKTDEK MGITPLKNYKPVIVPGLGRSIGFLPKMPRLKAMHLFLWYLVYGHPAGHTGEQPALHSERKTGKQESSRPG AQPSSGDDWDTSEAKNNTESSSWESEMELSTEIVYVDEISWMRYVPPIPIHRDFGFGWALVSDILLCLPL SIFVQLVQVSYKVDNLEDFLNDPLKKHTLIRFLPRHIRQQLLYKRRYIFSVVENLQRLCYMGLLQFGPTE KFQDKDQVFVFLKKNAVIVDTTICDPHYNLAHSSRPFERRLYVLDSMQDVECYWFDLQCICLNTPLGVVR CPCAQKICPDPGSDPEGSLRKEQESAMDKHNLERKCAMLEYTTGSREVVDEGLVPGDGLGAAGLDSSFYA HLKRNWVWTSYIINKARKNNTSENGLTGRLQTFLSKRPMPLGSGGSGRLPLWSEGRADAELCADKEEQFE LDREPTPGRNRKVRGGKSQKRKRLKKEPIRKTKRRRRGEHPEAKSKKLRYQDEADQNALRMMTRLRVSWS MQEDGLLMLCRIASNVLNTKVKGPFVTWQVVRDILHATFEESLDKTSHSVGRRARYIVKNPQAFMNYKVC LAEVYQDKALVGDFMSRKGNYEDPKVCAKEFKEFVEKLKEKFSSGLRNPNLEIPNTLQELFAKYRVLAIG DEKDRVRKEDELNSVEDIHFLVLQNLIQSTLSLSNSQSNSCQSFQIFRLYREFREPVLVRAFMECQKRSL VNRRRVSHSQGPKKNRAVPFVPMSYQLSQSYYKLFTWRFPTTICTESFQFYDRLRTNGMLDQPDHFSFKD LDSSDPSNDLVAFSLDSPGGHCVTALALFSLGLLSVDVRIPEQIVVVDSSMVESEVMKSLGKDGGLDDDE EEEDLDEGSGTKRQGVEVKAHQASHTKYLLMRGYYTVPGMVSTRNLNPNDSIVVNSCQVKFRLRNTPAST QLGPTGFTATPLEELQAGLSCLPASFTSLVDPQLRTHCPEEFAHQMAQSGYSPEDVAASLEILQAVAAAD CFGIDKEKLSRQFSALEKIADRRTRTFLDYIQDLLEQEQVMEVGGNTVRLVTMASAQPWLLHSMRLRDME VDTKASGDDSQSRLPEGPSIEDHTSEGAAVPPVSSHSTKKRPHCPETDAEEATRLPAKKPTLQDVRVAAS PRPGAEEQAEAQAPAQLAAPEDADAGGPRQENQENVGVSGLEQLGCEFQLPEGSEDPRGLTESNMAQAAW ESGCERVCFVGRPWRGVDGHLNMPVCKGMLEAVLYHIMSRPGVPESCLLQYYQGVLQPVAVLELLRGLES LGCIQKRTLRKPASVSLFSRPVVEGLGQASEAEALSCHESTVTFYEPTLDCTIRLGRVFPHDINWNKWIH L
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