NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS47582.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
47582.1 Public Homo sapiens 7 NACAD 24 110 108 CCDS HistoryNCBI Gene:23148Re-query CCDS DB by CCDS ID:47582.1See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 47582.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000490531.3 ENSP00000420477.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000490531.3Link to Ensembl Protein Viewer:ENSP00000420477.2Re-query CCDS DB by Nucleotide ID:ENST00000490531Re-query CCDS DB by Protein ID:ENSP00000420477
Original member Current member NCBI NM_001146334.2 NP_001139806.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001146334.2Link to Protein Sequence:NP_001139806.1Re-query CCDS DB by Nucleotide ID:NM_001146334Re-query CCDS DB by Protein ID:NP_001139806Link to BLAST:NP_001139806.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001139806.1 1562 O15069 1562 100% 0 0

Chromosomal Locations for CCDS 47582.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 45080509 45080523 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 45080640 45080762 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 45080876 45081022 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 45081117 45081263 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 45081601 45081672 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 45081755 45081867 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 45082108 45086112 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 45088828 45088894 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4689 nt):
ATGCCTGGGGAGGCTGCCCGCGCCGAGCTGCTGCTGCCCGAGGCGGACCGACCCGGGCCCCGCACAGATC
TG
TCCTGCGATGCGGCCGCTGCCACCACCATCCTGGGAGGGGACCGGCGGGAGCCCTGTGCTCTGACCCC
A
GGGCCCAGCCACCTGGCCCTCACGTTCCTGCCCAGCAAGCCGGGTGCCCGGCCCCAGCCCGAGGGAGCC
AGC
TGGGATGCAGGGCCTGGTGGGGCACCCTCGGCCTGGGCGGACCCAGGGGAGGGCGGCCCAAGCCCCA
TG
CTCCTCCCTGAGGGCCTGTCTTCCCAGGCTCTGTCCACGGAGGCTCCTCTCCCGGCCACCCTGGAGCC
C
CGGATTGTGATGGGAGAGGAGACGTGCCAGGCCCTCCTGTCACCCAGAGCTGCCCGGACAGCGCTCAGG
GAC
CAGGAGGGTGGGCACGCAAGCCCAGACCCACCCCCCGAGCTGTGTTCTCAGGGTGATCTTTCTGTGC
CT
TCCCCTCCCCCAGACCCTGATTCCTTCTTCACGCCTCCCTCCACCCCCACCAAGACCACCTATGCCCT
G
CTTCCTGCCTGTGGGCCCCACGGGGACGCCAGGGACTCAGAGGCTGAGCTGCGGGATGAGCTGCTGGAC
TCG
CCCCCCGCCTCACCCTCGGGCTCCTACATTACGGCCGATGGGGACAGCTGGGCCTCTTCACCCTCCT
GT
TCCCTCAGCCTGCTGGCTCCGGCTGAAGGGCTGGACTTCCCCTCAGGCTGGGGCCTGTCCCCGCAGGG
G
TCCATGGTGGATGAACGAGAGCTGCACCCAGCAGGGACCCCAGAGCCCCCGTCCTCTGAGTCCAGCCTC
TCT
GCAGACAGCAGCTCCTCCTGGGGCCAGGAGGGCCACTTCTTCGACCTGGACTTCCTGGCCAATGACC
CA
ATGATCCCCGCAGCCCTCCTACCCTTCCAGGGCAGCCTCATCTTTCAGGTGGAGGCAGTGGAGGTGAC
A
CCGCTATCCCCAGAGGAAGAAGAAGAGGAGGCTGTGGCGGATCCCGACCCAGGTGGGGACCTGGCTGGG
GAG
GGTGAGGAGGACAGCACGTCTGCCTCCTTCCTGCAGTCACTGTCTGACCTGTCCATCACGGAGGGCA
TG
GACGAGGCTTTTGCCTTCCGGGACGACACCTCTGCAGCCTCCTCTGATTCAGACTCAGCCTCCTACGC
A
GAGGCAGATGATGAGAGGCTGTACAGCGGGGAGCCCCATGCCCAGGCCACTTTGCTCCAGGACAGTGTC
CAG
AAGACAGAGGAGGAGAGCGGAGGTGGGGCCAAGGGGCTGCAGGCTCAGGATGGGACTGTGTCCTGGG
CC
GTGGAGGCTGCTCCTCAGACCTCAGACAGAGGGGCCTATCTGTCCCAGAGACAGGAATTGATCTCAGA
A
GTAACAGAAGAGGGCCTTGCTTTAGGCCAGGAGTCCACTGCCACTGTGACCCCTCACACTCTGCAGGTA
GCC
CCAGGCCTCCAGGTGGAGGTGGCTACCAGAGTGACCCCACAGGCTGGGGAGGAAGAAACAGACTCCA
CC
GCTGGACAAGAATCTGCTGCCATGGCAATGCCTCAGCCCTCCCAGGAGGGCATCAGCGAGATCTTAGG
C
CAAGAGTCTGTCACTGCAGAAAAACTTCCAACTCCACAGGAAGAAACAAGCCTCACATTGTGTCCAGAC
TCT
CCTCAGAACTTGAAGGAAGAAGGAGGGCTGGACCTCCCCTCTGGCAGAAAGCCTGTAGCTGCAGCCA
CG
ATTGTCCCCAGGCAGGCTAAAGAGGACCTCACCTTACCCCAGGACTCCGCTATGACACCGCCTCTGCC
C
CTACAAGACACAGATCTCTCATCAGCCCCAAAGCCTGTGGCTGCAGCCACGATTGTGTCCCAGCAGGCT
GAA
GAGGGCCTCACCTTACCCCAGGACTCCGTTATGACACCGCCTCTGCCCCTACAAGACACAGAACTCT
CG
TCAGCCCCAAAGCCTGTGGCTGCAGCCACGCTTGTGTCCCAGCAGGCTGAAGAGGGCCTCACCTTACC
C
CAGGACTCCGCTATGACACCGCCTCTGCCCCTACAAGACACAGATCTCTCGTCAGCCCCAAAGCCTGTG
GCT
GCAGCCACGCTTGTGTCCCAGCAGGCTGAAGAGGGCCTCACCTTACCCCAGGACTCCGCTATGACAC
CG
CCTCTGCCCCTACAAGACACAGATCTCTCGTCAGCCCCAAAGCCTGTGGCTGCAGCCACGCTTGTGTC
C
CAGCAGGCTGAAGAGGGCCTCACCTTACCCCAGGACTCCGCTATGACACCGCCTCTGCCCCTACAAGAC
ACA
GATCTCTCGTCAGCCCCAAAGCCTGTGGCTGCAGCCACGATTGTGTCCCAGCAGGCTGAAGAGGGCC
TC
ACCTTACCCCAGGACTCCGCTATGACACCGCCTCTGCCCCTACAAGACACAGATCTCTCGTCAGCCCC
A
AAGCCTGTGGCTGCAGCCACGATTGTGTCCCAGCAGGCTGAAGAGGGCCTCACCTTACCCCAGGACTCC
GCT
ATGACACCGCCTCTGCCCCTACAAGACACAGATCTCTCGTCAGCCCCAAAGCCTGTGGCTGCAGCCA
CG
CCTGTGTCCCAGCAGGCTGAAGAGGGCCTCACCTTACCCCAGGACTCCGCTATGACACCGCCTCTGCC
C
CTACAAGACACAGATCTCTCGTCAGCCCCAAAGCCTGTGGCTGCAGCCACGCCTGTGTCCCAGCAGGCT
GAA
GAGGGCCTCACCTTACCCCAGGACTCCGCTATGACAGCACCTCTGCCTCTGCAAGACACAGGCCCCA
CC
TCAGGTCCAGAGCCTCTGGCTGTGGCCACCCCTCAAACCTTGCAGGCAGAAGCAGGCTGTGCCCCAGG
G
ACAGAGCCTGTGGCCACCATGGCTCAGCAGGAAGTAGGTGAGGCCTTAGGCCCCAGGCCAGCACCTGAG
GAG
AAGAATGCAGCCCTCCCTACAGTCCCGGAGCCTGCAGCCTTGGACCAGGTCCAACAGGATGACCCAC
AG
CCAGCTGCAGAAGCTGGGACACCTTGGGCCGCACAGGAAGATGCGGATTCCACTTTGGGCATGGAGGC
C
CTCAGTCTCCCTGAGCCGGCCTCTGGTGCTGGGGAGGAAATAGCAGAAGCCCTTTCTAGGCCTGGACGG
GAA
GCATGTCTGGAAGCGCGAGCGCACACAGGTGATGGGGCTAAGCCTGACTCACCCCAAAAGGAGACCC
TG
GAGGTTGAGAACCAGCAGGAAGGAGGCCTGAAGCCACTGGCACAGGAACATGGACCCAGGTCAGCACT
T
GGAGGTGCAAGGGAGGTCCCCGATGCGCCTCCTGCTGCCTGCCCTGAGGTCAGCCAGGCCCGGCTCCTG
AGC
CCAGCCAGGGAGGAAAGAGGCCTGAGTGGCAAGTCCACCCCGGAGCCCACGCTTCCCTCAGCTGTGG
CC
ACAGAGGCCAGTCTGGACTCCTGCCCAGAGTCTTCAGTAGGGGCTGTGTCCAGTCTGGACAGAGGCTG
C
CCTGACGCGCCTGCCCCCACGTCTGCACCAACCTCCCAGCAGCCGGAGCCTGTACTGGGTCTGGGCAGT
GTT
GAGCAACCCCACGAAGTACCCAGTGTCCTTGGCACCCCCTTGCTGCAGCCCCCAGAAAACCTTGCCA
AG
GGTCAGCCCAGCACGCCCGTGGACAGGCCCCTGGGCCCTGACCCTTCTGCTCCTGGTACCCTTGCTGG
G
GCAGCCCTACCCCCACTGGAGCCCCCAGCCCCCTGCCTGTGCCAGGACCCCCAGGAAGACTCTGTGGAA
GAC
GAGGAGCCCCCAGGCTCTCTGGGCCTCCCACCGCCCCAGGCAGGAGTCCAGCCTGCCGCTGCTGCTG
TC
TCAGGAACCACACAGCCTCTGGGGACTGGGCCGCGAGTCAGCCTCTCGCCTCACTCCCCACTCCTCAG
C
CCCAAGGTGGCCTCCATGGATGCCAAAGACCTGGCCTTGCAGATCTTGCCGCCTTGCCAAGTGCCTCCT
CCC
TCTGGGCCCCAGAGCCCAGCTGGCCCTCAAGGGCTCTCAGCCCCCGAGCAGCAAGAGGATGAGGACA
GC
CTGGAGGAAGACTCGCCTCGGGCCCTGGGCTCGGGCCAGCATTCGGATAGCCACGGGGAGTCATCAGC
C
GAGCTGGACGAGCAGGACATCTTGGCTCCTCAGACCGTGCAGTGTCCAGCCCAGGCCCCAGCAGGCGGC
AGT
GAGGAGACCATCGCCAAAGCCAAGCAGAGTCGCAGTGAGAAGAAGGCCCGAAAGGCAATGTCAAAGC
TG
GGCTTGCGGCAGATTCAGGGAGTCACCAGGATCACCATCCAGAAGTCCAAGAACATCCTCTTTGTCAT
C
GCCAAGCCTGATGTCTTCAAGAGCCCAGCCTCAGACACTTATGTGGTCTTTGGCGAGGCCAAGATTGAG
GAC
CTGTCCCAGCAAGTGCACAAAGCCGCAGCTGAGAAGTTTAAGGTGCCCTCAGAGCCCTCAGCCTTGG
TC
CCTGAGTCAGCACCCAGGCCCCGGGTGAGGCTGGAGTGCAAGGAAGAGGAAGAGGAGGAGGAGGAAGA
G
GTGGACGAGGCGGGGCTGGAACTGCGTGACATTGAGCTGGTGATGGCGCAGGCCAATGTGTCCAGGGCC
AAG
GCCGTGCGGGCTCTGAGAGACAACCACAGTGACATCGTCAACGCCATCATGGAACTGACCATGTAG


Translation (1562 aa):
MPGEAARAELLLPEADRPGPRTDLSCDAAAATTILGGDRREPCALTPGPSHLALTFLPSKPGARPQPEGA
S
WDAGPGGAPSAWADPGEGGPSPMLLPEGLSSQALSTEAPLPATLEPRIVMGEETCQALLSPRAARTALR
D
QEGGHASPDPPPELCSQGDLSVPSPPPDPDSFFTPPSTPTKTTYALLPACGPHGDARDSEAELRDELLD
S
PPASPSGSYITADGDSWASSPSCSLSLLAPAEGLDFPSGWGLSPQGSMVDERELHPAGTPEPPSSESSL
S
ADSSSSWGQEGHFFDLDFLANDPMIPAALLPFQGSLIFQVEAVEVTPLSPEEEEEEAVADPDPGGDLAG
E
GEEDSTSASFLQSLSDLSITEGMDEAFAFRDDTSAASSDSDSASYAEADDERLYSGEPHAQATLLQDSV
Q
KTEEESGGGAKGLQAQDGTVSWAVEAAPQTSDRGAYLSQRQELISEVTEEGLALGQESTATVTPHTLQV
A
PGLQVEVATRVTPQAGEEETDSTAGQESAAMAMPQPSQEGISEILGQESVTAEKLPTPQEETSLTLCPD
S
PQNLKEEGGLDLPSGRKPVAAATIVPRQAKEDLTLPQDSAMTPPLPLQDTDLSSAPKPVAAATIVSQQA
E
EGLTLPQDSVMTPPLPLQDTELSSAPKPVAAATLVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPV
A
AATLVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAATLVSQQAEEGLTLPQDSAMTPPLPLQD
T
DLSSAPKPVAAATIVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAATIVSQQAEEGLTLPQDS
A
MTPPLPLQDTDLSSAPKPVAAATPVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAATPVSQQA
E
EGLTLPQDSAMTAPLPLQDTGPTSGPEPLAVATPQTLQAEAGCAPGTEPVATMAQQEVGEALGPRPAPE
E
KNAALPTVPEPAALDQVQQDDPQPAAEAGTPWAAQEDADSTLGMEALSLPEPASGAGEEIAEALSRPGR
E
ACLEARAHTGDGAKPDSPQKETLEVENQQEGGLKPLAQEHGPRSALGGAREVPDAPPAACPEVSQARLL
S
PAREERGLSGKSTPEPTLPSAVATEASLDSCPESSVGAVSSLDRGCPDAPAPTSAPTSQQPEPVLGLGS
V
EQPHEVPSVLGTPLLQPPENLAKGQPSTPVDRPLGPDPSAPGTLAGAALPPLEPPAPCLCQDPQEDSVE
D
EEPPGSLGLPPPQAGVQPAAAAVSGTTQPLGTGPRVSLSPHSPLLSPKVASMDAKDLALQILPPCQVPP
P
SGPQSPAGPQGLSAPEQQEDEDSLEE
DSPRALGSGQHSDSHGESSAELDEQDILAPQTVQCPAQAPAGG
S
EETIAKAKQSRSEKKARK
AMSKLGLRQIQGVTRITIQKSKNILFVIAKPDVFKSPASDTYVVFGEAKIE
D
LSQQVHKAAAEKFKVPSEPSALVPESAPRPRVRLECKEEEEEEEEE
VDEAGLELRDIELVMAQANVSRA
K
AVRALRDNHSDIVNAIM
ELTM



Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser