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Report for CCDS812.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
812.1 Public Homo sapiens 1 GSTM3 24 110 108 CCDS HistoryNCBI Gene:2947Re-query CCDS DB by CCDS ID:812.1Re-query CCDS DB by GeneID:2947See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 812.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000256594.7 ENSP00000256594.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000256594.7Link to Ensembl Protein Viewer:ENSP00000256594.3Re-query CCDS DB by Nucleotide ID:ENST00000256594Re-query CCDS DB by Protein ID:ENSP00000256594
Original member Current member EBI ENST00000361066.7 ENSP00000354357.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000361066.7Link to Ensembl Protein Viewer:ENSP00000354357.2Re-query CCDS DB by Nucleotide ID:ENST00000361066Re-query CCDS DB by Protein ID:ENSP00000354357
Original member Current member NCBI NM_000849.5 NP_000840.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_000849.5Link to Protein Sequence:NP_000840.2Re-query CCDS DB by Nucleotide ID:NM_000849Re-query CCDS DB by Protein ID:NP_000840Link to BLAST:NP_000840.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_000840.2 225 P21266 225 100% 0 0

Chromosomal Locations for CCDS 812.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 109737071 109737169 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 109737457 109737567 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 109737656 109737751 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 109738091 109738191 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 109738285 109738366 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 109739429 109739493 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 109739833 109739908 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 109740240 109740287 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (678 nt):
ATGTCGTGCGAGTCGTCTATGGTTCTCGGGTACTGGGATATTCGTGGGCTGGCGCACGCCATCCGCCTGC
TCCTGGAGTTCACGGATACCTCTTATGAGGAGAAACGGTACACGTGCGGGGAAGCTCCTGACTATGATCG
AAGCCAATGGCTGGATGTGAAATTCAAGCTAGACCTGGACTTTCCTAATCTGCCCTACCTCCTGGATGGG
AAGAACAAGATCACCCAGAGCAATGCCATCTTGCGCTACATCGCTCGCAAGCACAACATGTGTGGTGAGA
CTGAAGAAGAAAAGATTCGAGTGGACATCATAGAGAACCAAGTAATGGATTTCCGCACACAACTGATAAG
GCTCTGTTACAGCTCTGACCACGAAAAACTGAAGCCTCAGTACTTGGAAGAGCTACCTGGACAACTGAAA
CAATTCTCCATGTTTCTGGGGAAATTCTCATGGTTTGCCGGGGAAAAGCTCACCTTTGTGGATTTTCTCA
CCTATGATATCTTGGATCAGAACCGTATATTTGACCCCAAGTGCCTGGATGAGTTCCCAAACCTGAAGGC
TTTCATGTGCCGTTTTGAGGCTTTGGAGAAAATCGCTGCCTACTTACAGTCTGATCAGTTCTGCAAGATG
CCCATCAACAACAAGATGGCCCAGTGGGGCAACAAGCCTGTATGCTGA

Translation (225 aa):
MSCESSMVLGYWDIRGLAHAIRLLLEFTDTSYEEKRYTCGEAPDYDRSQWLDVKFKLDLDFPNLPYLLDG
KNKITQSNAILRYIARKHNMCGETEEEKIRVDIIENQVMDFRTQLIRLCYSSDHEKLKPQYLEELPGQLK
QFSMFLGKFSWFAGEKLTFVDFLTYDILDQNRIFDPKCLDEFPNLKAFMCRFEALEKIAAYLQSDQFCKM
PINNKMAQWGNKPVC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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