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Report for CCDS18045.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
18045.1 Public Mus musculus 4 Ndufb6 23 108 98 CCDS HistoryNCBI Gene:230075Re-query CCDS DB by CCDS ID:18045.1See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 18045.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000095128.9 ENSMUSP00000092746.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000095128.9Link to Ensembl Protein Viewer:ENSMUSP00000092746.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000095128Re-query CCDS DB by Protein ID:ENSMUSP00000092746
Original member Current member NCBI NM_001033305.3 NP_001028477.1 Accepted alive Link to Nucleotide Sequence:NM_001033305.3Link to Protein Sequence:NP_001028477.1Re-query CCDS DB by Nucleotide ID:NM_001033305Re-query CCDS DB by Protein ID:NP_001028477Link to BLAST:NP_001028477.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001028477.1 128 Q3UIU2 128 100% 0 0

Chromosomal Locations for CCDS 18045.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 4 (NC_000070.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 40270779 40270847 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 40272810 40272854 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 40277653 40277745 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 40279158 40279337 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (387 nt):
ATGTCAGGGTACACGCCGGATGAGAAGCTGCGGCTGCAGCAGCTGCGGGAGCTAAGGAGACGATGGCTGA
AGGACCAGGAGCTGAGTCCCCGGGAGCCCGTGTTGCCCCCGCGCAGGATGTGGCCCCTGGAGCGATTCTG
GGATAACTTTTTGCGGGACGGGGCCGTGTGGAAGAACATGGTCTTTAAGGCGTACCGCTCCAGTCTCTTC
GCTGTTTCTCATGTGCTTATACCTATGTGGTTTGTTCACTATTATGTCAAATATCATATGGCTACTAAAC
CATACACCATTGTTAGCTCGAAGCCCAGGATATTTCCAGGTGATACAATTCTGGAGACTGGAGAAGTAAT
TCCACCAATGAGAGATTTTCCTGATCAACATCATTGA

Translation (128 aa):
MSGYTPDEKLRLQQLRELRRRWLKDQELSPREPVLPPRRMWPLERFWDNFLRDGAVWKNMVFKAYRSSLF
AVSHVLIPMWFVHYYVKYHMATKPYTIVSSKPRIFPGDTILETGEVIPPMRDFPDQHH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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